Back to Build/check report for BioC 3.23:   simplified   long
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 791/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gDNAx 1.9.0  (landing page)
Robert Castelo
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/gDNAx
git_branch: devel
git_last_commit: 64d243e
git_last_commit_date: 2025-10-29 11:24:57 -0500 (Wed, 29 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is only available as a source package that needs compilation


BUILD BIN results for gDNAx on kjohnson3

To the developers/maintainers of the gDNAx package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gDNAx.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: gDNAx
Version: 1.9.0
Command: rm -rf gDNAx.buildbin-libdir && mkdir gDNAx.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gDNAx_1.9.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gDNAx.buildbin-libdir
StartedAt: 2025-11-12 20:58:00 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 20:58:21 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 21.5 seconds
RetCode: 0
Status:   OK  
PackageFile: gDNAx_1.9.0.tgz
PackageFileSize: 1.108 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf gDNAx.buildbin-libdir && mkdir gDNAx.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gDNAx_1.9.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gDNAx.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=gDNAx.buildbin-libdir gDNAx_1.9.0.tar.gz'
>>>>>>> 

* installing *source* package ‘gDNAx’ ...
** this is package ‘gDNAx’ version ‘1.9.0’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gDNAx)