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This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
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Package 249/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bsseq 1.47.1  (landing page)
Kasper Daniel Hansen
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/bsseq
git_branch: devel
git_last_commit: 46b4295
git_last_commit_date: 2025-10-31 11:03:21 -0500 (Fri, 31 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped

BUILD results for bsseq on kjohnson3

To the developers/maintainers of the bsseq package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bsseq.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: bsseq
Version: 1.47.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data bsseq
StartedAt: 2025-11-12 15:54:28 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 15:54:29 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data bsseq
###
##############################################################################
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* checking for file ‘bsseq/DESCRIPTION’ ... OK
* preparing ‘bsseq’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package (it is needed to build vignettes)
      -----------------------------------
ERROR: dependencies ‘HDF5Array’, ‘rhdf5’ are not available for package ‘bsseq’
Perhaps try a variation of:
install.packages(c('HDF5Array', 'rhdf5'))
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpsrMtkA/Rinst17c51388d03db/bsseq’
      -----------------------------------
ERROR: package installation failed