Multiple platform build/check report for BioC 3.23 - BUILD results for TDbasedUFEadv on kjohnson3

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences"	4866
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2026-03-20 r89666) -- "Unsuffered Consequences"	4545
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for TDbasedUFEadv on kjohnson3

To the developers/maintainers of the TDbasedUFEadv package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TDbasedUFEadv.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: TDbasedUFEadv

Version: 1.11.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data TDbasedUFEadv

StartedAt: 2026-03-20 20:48:00 -0400 (Fri, 20 Mar 2026)

EndedAt: 2026-03-20 20:50:33 -0400 (Fri, 20 Mar 2026)

EllapsedTime: 153.6 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data TDbasedUFEadv
###
##############################################################################
##############################################################################


* checking for file ‘TDbasedUFEadv/DESCRIPTION’ ... OK
* preparing ‘TDbasedUFEadv’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘Enrichment.Rmd’ using rmarkdown
trying URL 'https://stringdb-downloads.org/download/protein.aliases.v11.5/9606.protein.aliases.v11.5.txt.gz'
Content type 'application/octet-stream' length 21726816 bytes (20.7 MB)
==================================================
downloaded 20.7 MB

trying URL 'https://stringdb-downloads.org/download/protein.info.v11.5/9606.protein.info.v11.5.txt.gz'
Content type 'application/octet-stream' length 1901833 bytes (1.8 MB)
==================================================
downloaded 1.8 MB


Quitting from Enrichment.Rmd:120-133 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `readPNG()`:
! libpng error: Not a PNG file
---
Backtrace:
    ▆
 1. └─string_db$plot_network(hits)
 2.   └─STRINGdb (local) get_png(...)
 3.     └─png::readPNG(postFormSmart(urlStr, .params = params, .ctype = "raw"))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'Enrichment.Rmd' failed with diagnostics:
libpng error: Not a PNG file
--- failed re-building ‘Enrichment.Rmd’

--- re-building ‘Explanation_of_TDbasedUFEadv.Rmd’ using rmarkdown
--- finished re-building ‘Explanation_of_TDbasedUFEadv.Rmd’

--- re-building ‘How_to_use_TDbasedUFEadv.Rmd’ using rmarkdown
--- finished re-building ‘How_to_use_TDbasedUFEadv.Rmd’

SUMMARY: processing the following file failed:
  ‘Enrichment.Rmd’

Error: Vignette re-building failed.
Execution halted