Back to Build/check report for BioC 3.23:   simplified   long
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2025-11-13 11:32 -0500 (Thu, 13 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm64R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" 4013
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2037/2325HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpaNorm 1.5.0  (landing page)
Dharmesh D. Bhuva
Snapshot Date: 2025-11-12 13:40 -0500 (Wed, 12 Nov 2025)
git_url: https://git.bioconductor.org/packages/SpaNorm
git_branch: devel
git_last_commit: 2845190
git_last_commit_date: 2025-10-29 11:32:47 -0500 (Wed, 29 Oct 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  ERROR    ERROR  skippedskipped


BUILD results for SpaNorm on kjohnson3

To the developers/maintainers of the SpaNorm package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpaNorm.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SpaNorm
Version: 1.5.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpaNorm
StartedAt: 2025-11-12 17:15:48 -0500 (Wed, 12 Nov 2025)
EndedAt: 2025-11-12 17:15:49 -0500 (Wed, 12 Nov 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpaNorm
###
##############################################################################
##############################################################################


* checking for file ‘SpaNorm/DESCRIPTION’ ... OK
* preparing ‘SpaNorm’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
      -----------------------------------
ERROR: dependencies ‘edgeR’, ‘scran’ are not available for package ‘SpaNorm’
Perhaps try a variation of:
install.packages(c('edgeR', 'scran'))
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmppAeeqm/Rinst134ad6155ea22/SpaNorm’
      -----------------------------------
ERROR: package installation failed