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This page was generated on 2025-11-19 06:45 -0500 (Wed, 19 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4858
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 34/49HostnameOS / ArchINSTALLBUILDCHECK
metaboliteIDmapping 0.99.11  (landing page)
Sebastian Canzler
Snapshot Date: 2025-11-19 05:45 -0500 (Wed, 19 Nov 2025)
git_url: https://git.bioconductor.org/packages/metaboliteIDmapping
git_branch: RELEASE_3_22
git_last_commit: a6a6bf6
git_last_commit_date: 2025-09-16 11:14:40 -0500 (Tue, 16 Sep 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for metaboliteIDmapping on nebbiolo2

To the developers/maintainers of the metaboliteIDmapping package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: metaboliteIDmapping
Version: 0.99.11
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data metaboliteIDmapping
StartedAt: 2025-11-19 05:57:33 -0500 (Wed, 19 Nov 2025)
EndedAt: 2025-11-19 05:57:43 -0500 (Wed, 19 Nov 2025)
EllapsedTime: 9.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data metaboliteIDmapping
###
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* checking for file ‘metaboliteIDmapping/DESCRIPTION’ ... OK
* preparing ‘metaboliteIDmapping’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘metaboliteIDmapping’ ...
** this is package ‘metaboliteIDmapping’ version ‘0.99.11’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error loading resource.
 attempting to re-download
downloading 1 resources
retrieving 1 resource

Error: package or namespace load failed for ‘metaboliteIDmapping’:
 .onLoad failed in loadNamespace() for 'metaboliteIDmapping', details:
  call: NULL
  error: failed to load resource
  name: AH91792
  title: Mapping table of metabolite IDs and common names
  reason: Corrupt Cache: resource id
  See AnnotationHub's TroubleshootingTheHubs vignette section on corrupt cache
  cache: /home/biocbuild/.cache/R/AnnotationHub
  reason: error in evaluating the argument 'table' in selecting a method for function 'match': ℹ In argument: `rpath = unname(bfcrpath(x, rids = rids))`.
Caused by error in `bfcrpath()`:
! all(rids %in% bfcrid(x)) is not TRUE
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/tmp/RtmpTn1O9g/Rinst50c0b31ce400f/metaboliteIDmapping’
      -----------------------------------
ERROR: package installation failed