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BioC 3.2: BUILD report for flowType on moscato1

This page was generated on 2016-04-23 10:17:56 -0700 (Sat, 23 Apr 2016).

Package 371/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowType 2.8.4
Nima Aghaeepour
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/flowType
Last Changed Rev: 116674 / Revision: 116712
Last Changed Date: 2016-04-21 14:00:24 -0700 (Thu, 21 Apr 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  ERROR  skipped 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK [ ERROR ] skipped  skipped 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: flowType
Version: 2.8.4
Command: chmod a+r flowType -R && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data flowType
StartedAt: 2016-04-22 20:09:58 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 20:10:53 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 55.3 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r flowType -R && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data flowType
###
##############################################################################
##############################################################################


* checking for file 'flowType/DESCRIPTION' ... OK
* preparing 'flowType':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"D:/biocbld/bbs-3.2-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
 ERROR
Loading required package: Rcpp
Loading required package: BH

Error: processing vignette 'flowType.Rnw' failed with diagnostics:
 chunk 13 (label = xtabout) 
Error in `colnames<-`(`*tmp*`, value = c("Phenotype", "p-value", "adjusted p-value",  : 
  length of 'dimnames' [2] not equal to array extent
Execution halted