Panagiotis Moulos
| Snapshot Date: 2024-06-26 14:00 -0400 (Wed, 26 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/metaseqR2 |
| git_branch: RELEASE_3_19 |
| git_last_commit: 355b403 |
| git_last_commit_date: 2024-04-30 11:23:52 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-06-28 17:41 -0400 (Fri, 28 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4760 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4494 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4508 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4466 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4362 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1225/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| metaseqR2 1.16.0 (landing page) Panagiotis Moulos
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
|
To the developers/maintainers of the metaseqR2 package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metaseqR2.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: metaseqR2 |
| Version: 1.16.0 |
| Command: rm -rf metaseqR2.buildbin-libdir && mkdir metaseqR2.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=metaseqR2.buildbin-libdir metaseqR2_1.16.0.tar.gz |
| StartedAt: 2024-06-27 08:28:58 -0400 (Thu, 27 Jun 2024) |
| EndedAt: 2024-06-27 08:30:44 -0400 (Thu, 27 Jun 2024) |
| EllapsedTime: 106.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: metaseqR2_1.16.0.zip |
| PackageFileSize: 4.499 MiB |
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### Running command:
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### rm -rf metaseqR2.buildbin-libdir && mkdir metaseqR2.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=metaseqR2.buildbin-libdir metaseqR2_1.16.0.tar.gz
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* installing *source* package 'metaseqR2' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
gcc -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
26 | double esttotalperlength = total/2;
| ^~~~~~~~~~~~~~~~~
gcc -shared -s -static-libgcc -o metaseqR2.dll tmp.def pval.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/meat/metaseqR2.buildbin-libdir/00LOCK-metaseqR2/00new/metaseqR2/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
package 'locfit' was built under R version 4.4.1
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: package 'locfit' was built under R version 4.4.1
** testing if installed package can be loaded from final location
Warning: package 'locfit' was built under R version 4.4.1
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'metaseqR2' as metaseqR2_1.16.0.zip
* DONE (metaseqR2)