Back to Mac ARM64 build report for BioC 3.18
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-04-18 11:32:07 -0400 (Thu, 18 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 191/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biocthis 1.12.0  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024)
git_url: https://git.bioconductor.org/packages/biocthis
git_branch: RELEASE_3_18
git_last_commit: 7a2bcb5
git_last_commit_date: 2023-10-24 11:26:46 -0400 (Tue, 24 Oct 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD BIN results for biocthis on kjohnson1


To the developers/maintainers of the biocthis package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: biocthis
Version: 1.12.0
Command: rm -rf biocthis.buildbin-libdir && mkdir biocthis.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh biocthis_1.12.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R biocthis.buildbin-libdir
StartedAt: 2024-04-18 08:24:37 -0400 (Thu, 18 Apr 2024)
EndedAt: 2024-04-18 08:24:44 -0400 (Thu, 18 Apr 2024)
EllapsedTime: 6.8 seconds
RetCode: 0
Status:   OK  
PackageFile: biocthis_1.12.0.tgz
PackageFileSize: 698.5 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf biocthis.buildbin-libdir && mkdir biocthis.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh biocthis_1.12.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R biocthis.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=biocthis.buildbin-libdir biocthis_1.12.0.tar.gz'
>>>>>>> 

* installing *source* package ‘biocthis’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
** testing if installed package can be loaded from final location
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
Warning in normalizePath(tools::R_user_dir("R.cache", which = "cache")) :
  path[1]="/Users/biocbuild/Library/Caches/org.R-project.R/R/R.cache": No such file or directory
** testing if installed package keeps a record of temporary installation path
* DONE (biocthis)