Jason Ross
| Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024) |
| git_url: https://git.bioconductor.org/packages/Harman |
| git_branch: RELEASE_3_18 |
| git_last_commit: ae40a84 |
| git_last_commit_date: 2023-10-24 10:49:58 -0400 (Tue, 24 Oct 2023) |
| Back to Mac ARM64 build report for BioC 3.18 |
|
This page was generated on 2024-04-18 11:32:11 -0400 (Thu, 18 Apr 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kjohnson1 | macOS 13.6.1 Ventura | arm64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4388 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 931/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Harman 1.30.0 (landing page) Jason Ross
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | OK | OK | OK | OK | | |||||||
|
To the developers/maintainers of the Harman package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: Harman |
| Version: 1.30.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Harman |
| StartedAt: 2024-04-16 10:13:35 -0400 (Tue, 16 Apr 2024) |
| EndedAt: 2024-04-16 10:13:47 -0400 (Tue, 16 Apr 2024) |
| EllapsedTime: 12.2 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Harman
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’
* installing *source* package ‘Harman’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_ARRAYALIGNEMT=4 -D_USE_RCPP=1 -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include `/Library/Frameworks/R.framework/Resources/bin/Rscript -e "Rcpp:::CxxFlags()"` -I. -fPIC -falign-functions=64 -Wall -g -O2 -c Harman.cpp -o Harman.o
In file included from Harman.cpp:182:
./CSelectRandom.h:283:11: warning: variable 'seed' set but not used [-Wunused-but-set-variable]
size_t seed ;
^
./CSelectRandom.h:372:11: warning: variable 'seed' set but not used [-Wunused-but-set-variable]
size_t seed ;
^
./CSelectRandom.h:392:11: warning: unused variable 'currindex' [-Wunused-variable]
size_t currindex ;
^
./CSelectRandom.h:394:35: warning: unused variable 'it1' [-Wunused-variable]
std::vector<double>::iterator it1, it2 ;
^
./CSelectRandom.h:394:40: warning: unused variable 'it2' [-Wunused-variable]
std::vector<double>::iterator it1, it2 ;
^
./CSelectRandom.h:638:20: warning: unused variable 'ts1' [-Wunused-variable]
struct timespec ts1, ts2 ;
^
./CSelectRandom.h:638:25: warning: unused variable 'ts2' [-Wunused-variable]
struct timespec ts1, ts2 ;
^
./CSelectRandom.h:639:11: warning: unused variable 'time1' [-Wunused-variable]
double time1, time2 ;
^
./CSelectRandom.h:639:18: warning: unused variable 'time2' [-Wunused-variable]
double time1, time2 ;
^
./CSelectRandom.h:932:18: warning: variable 'reject' set but not used [-Wunused-but-set-variable]
long long int reject ;
^
./CSelectRandom.h:1019:23: warning: unused variable 'randData2' [-Wunused-variable]
size_t randData1, randData2 ;
^
./CSelectRandom.h:1021:12: warning: variable 'reject' set but not used [-Wunused-but-set-variable]
size_t reject ;
^
Harman.cpp:2480:12: warning: variable 'count' set but not used [-Wunused-but-set-variable]
size_t count ;
^
13 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o Harman.so Harman.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/00LOCK-Harman/00new/Harman/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Harman)