| Back to Multiple platform build/check report for BioC 3.18: simplified long | 
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This page was generated on 2024-04-17 11:35:59 -0400 (Wed, 17 Apr 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4676 | 
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4414 | 
| merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4437 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 847/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GEWIST 1.46.0  (landing page) Wei Q. Deng 
 | nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK |  | ||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK |  | ||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
| To the developers/maintainers of the GEWIST package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GEWIST.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. | 
| Package: GEWIST | 
| Version: 1.46.0 | 
| Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:GEWIST.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings GEWIST_1.46.0.tar.gz | 
| StartedAt: 2024-04-15 23:15:52 -0400 (Mon, 15 Apr 2024) | 
| EndedAt: 2024-04-15 23:19:17 -0400 (Mon, 15 Apr 2024) | 
| EllapsedTime: 204.3 seconds | 
| RetCode: 0 | 
| Status: OK | 
| CheckDir: GEWIST.Rcheck | 
| Warnings: 0 | 
##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:GEWIST.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings GEWIST_1.46.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/GEWIST.Rcheck’
* using R version 4.3.3 (2024-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘GEWIST/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘GEWIST’ version ‘1.46.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘GEWIST’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘car’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
effectPDF: no visible global function definition for ‘dnorm’
effectPDF: no visible global function definition for ‘dbeta’
effectPDF: no visible global function definition for ‘dunif’
effectPDF: no visible global function definition for ‘dweibull’
gewistLevene: no visible global function definition for ‘rchisq’
gewistLevene: no visible global function definition for ‘rnorm’
gewistLevene: no visible global function definition for ‘pf’
Undefined global functions or variables:
  dbeta dnorm dunif dweibull pf rchisq rnorm
Consider adding
  importFrom("stats", "dbeta", "dnorm", "dunif", "dweibull", "pf",
             "rchisq", "rnorm")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
            user system elapsed
effectPDF 20.341  0.131  20.473
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘GEWIST.rnw’ using ‘UTF-8’... OK
 OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.18-bioc/meat/GEWIST.Rcheck/00check.log’
for details.
GEWIST.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL GEWIST ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’ * installing *source* package ‘GEWIST’ ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GEWIST)
GEWIST.Rcheck/GEWIST-Ex.timings
| name | user | system | elapsed | |
| effectPDF | 20.341 | 0.131 | 20.473 | |
| gewistLevene | 0.416 | 0.000 | 0.416 | |