Lauren McIver
| Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023) |
| git_url: https://git.bioconductor.org/packages/Maaslin2 |
| git_branch: RELEASE_3_17 |
| git_last_commit: cec4c89 |
| git_last_commit_date: 2023-06-08 11:22:17 -0400 (Thu, 08 Jun 2023) |
| Back to Mac ARM64 build report for BioC 3.17 |
|
This page was generated on 2023-10-20 09:38:05 -0400 (Fri, 20 Oct 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1094/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Maaslin2 1.14.1 (landing page) Lauren McIver
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | OK | OK | OK | OK | | |||||||
|
To the developers/maintainers of the Maaslin2 package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: Maaslin2 |
| Version: 1.14.1 |
| Command: rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Maaslin2_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R Maaslin2.buildbin-libdir |
| StartedAt: 2023-10-19 14:28:25 -0400 (Thu, 19 Oct 2023) |
| EndedAt: 2023-10-19 14:28:52 -0400 (Thu, 19 Oct 2023) |
| EllapsedTime: 27.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: Maaslin2_1.14.1.tgz |
| PackageFileSize: 612.6 KiB |
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### Running command:
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### rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Maaslin2_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R Maaslin2.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=Maaslin2.buildbin-libdir Maaslin2_1.14.1.tar.gz'
>>>>>>>
* installing *source* package ‘Maaslin2’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
Package version inconsistency detected.
TMB was built with Matrix version 1.5.4
Current Matrix version is 1.5.4.1
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
Package version inconsistency detected.
glmmTMB was built with TMB version 1.9.3
Current TMB version is 1.9.4
Please re-install glmmTMB from source or restore original ‘TMB’ package (see '?reinstalling' for more information)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Maaslin2)