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This page was generated on 2023-10-20 09:38:05 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1081/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LowMACA 1.30.0  (landing page)
Giorgio Melloni , Stefano de Pretis
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/LowMACA
git_branch: RELEASE_3_17
git_last_commit: 0eaae9e
git_last_commit_date: 2023-04-25 10:38:36 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  ERROR    ERROR  skippedskipped

INSTALL results for LowMACA on kjohnson2


To the developers/maintainers of the LowMACA package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: LowMACA
Version: 1.30.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL LowMACA
StartedAt: 2023-10-15 17:29:05 -0400 (Sun, 15 Oct 2023)
EndedAt: 2023-10-15 17:30:11 -0400 (Sun, 15 Oct 2023)
EllapsedTime: 66.2 seconds
RetCode: 1
Status:   ERROR  

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL LowMACA
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’
* installing *source* package ‘LowMACA’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Checking if clustalo is in the PATH...
Checking clustalo Version...
sh: /usr/local/bin/clustalo: Bad CPU type in executable
Warning in system(paste(ClustalCommand, "--version"), intern = TRUE) :
  running command '/usr/local/bin/clustalo --version' had status 126
Error: package or namespace load failed for ‘LowMACA’:
 .onLoad failed in loadNamespace() for 'LowMACA', details:
  call: if (!grepl("^1.2", ClustalVersion)) warning("Clustal Omega version could be not compatible. LowMACA was tested on 1.2.x")
  error: argument is of length zero
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/LowMACA’