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This page was generated on 2023-04-19 11:01:56 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
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BUILD BIN results for multiscan on kjohnson


To the developers/maintainers of the multiscan package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1305/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
multiscan 1.58.0  (landing page)
Mizanur Khondoker
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/multiscan
git_branch: RELEASE_3_16
git_last_commit: 4fc2c34
git_last_commit_date: 2022-11-01 11:03:57 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: multiscan
Version: 1.58.0
Command: rm -rf multiscan.buildbin-libdir && mkdir multiscan.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh multiscan_1.58.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R multiscan.buildbin-libdir
StartedAt: 2023-04-18 17:42:43 -0400 (Tue, 18 Apr 2023)
EndedAt: 2023-04-18 17:42:55 -0400 (Tue, 18 Apr 2023)
EllapsedTime: 12.4 seconds
RetCode: 0
Status:   OK  
PackageFile: multiscan_1.58.0.tgz
PackageFileSize: 776.3 KiB

Command output

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###
### Running command:
###
###   rm -rf multiscan.buildbin-libdir && mkdir multiscan.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh multiscan_1.58.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R multiscan.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=multiscan.buildbin-libdir multiscan_1.58.0.tar.gz'
>>>>>>> 

* installing *source* package ‘multiscan’ ...
** using staged installation
** libs
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c multiscan.c -o multiscan.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o multiscan.so multiscan.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: -undefined dynamic_lookup may not work with chained fixups
installing to /Volumes/External/bbs-3.16-bioc-m1/meat/multiscan.buildbin-libdir/00LOCK-multiscan/00new/multiscan/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
*** Loaded multiscan Version 1.58.0 *** 
Type 'vignette("multiscan")' to view the package vignette.
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
*** Loaded multiscan Version 1.58.0 *** 
Type 'vignette("multiscan")' to view the package vignette.
** testing if installed package keeps a record of temporary installation path
* DONE (multiscan)


>>>>>>> 
>>>>>>> FIXING LINKS FOR multiscan.buildbin-libdir/multiscan/libs/multiscan.so
>>>>>>> 

install_name_tool -change "/opt/R/arm64/lib/libgcc_s.1.1.dylib" "/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libgcc_s.1.1.dylib" "multiscan.buildbin-libdir/multiscan/libs/multiscan.so"
install_name_tool -change "/opt/R/arm64/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libgfortran.5.dylib" "multiscan.buildbin-libdir/multiscan/libs/multiscan.so"
install_name_tool -change "/opt/R/arm64/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libquadmath.0.dylib" "multiscan.buildbin-libdir/multiscan/libs/multiscan.so"