Stefano Berri
| Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022) |
| git_url: https://git.bioconductor.org/packages/CNAnorm |
| git_branch: master |
| git_last_commit: 3cfbbc0 |
| git_last_commit_date: 2022-04-26 11:09:08 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.16 |
|
This page was generated on 2022-07-11 11:06:43 -0400 (Mon, 11 Jul 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4148 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4168 |
| kjohnson | macOS 12.4 Monterey | arm64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 3545 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CNAnorm package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNAnorm.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 353/2130 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CNAnorm 1.43.0 (landing page) Stefano Berri
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson | macOS 12.4 Monterey / arm64 | OK | NA | NA | NA | |||||||||
| Package: CNAnorm |
| Version: 1.43.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL CNAnorm |
| StartedAt: 2022-07-10 15:09:13 -0400 (Sun, 10 Jul 2022) |
| EndedAt: 2022-07-10 15:09:26 -0400 (Sun, 10 Jul 2022) |
| EllapsedTime: 12.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL CNAnorm
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘CNAnorm’ ...
** using staged installation
** libs
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c daxpy.f -o daxpy.o
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c ddot.f -o ddot.o
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dgbfa.f -o dgbfa.o
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dgbsl.f -o dgbsl.o
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dscal.f -o dscal.o
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dsmooth.f -o dsmooth.o
f951: Warning: Nonconforming tab character in column 1 of line 14 [-Wtabs]
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dsmooth.f:62:21:
62 | do 10 i=1,n-1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:70:8:
70 | & diff(i-1)*diff(i+1) .lt. 0.) isplit(i)=1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:50:6:
50 | function amed3(a,b,c)
| ^
Warning: ‘__result_amed3’ may be used uninitialized [-Wmaybe-uninitialized]
/opt/R/arm64/bin/gfortran -mtune=native -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c idamax.f -o idamax.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o CNAnorm.so daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1 -L/opt/R/arm64/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: object file (ddot.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: object file (dgbfa.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: object file (dgbsl.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: could not create compact unwind for _dgbsl_: registers 27 and 28 not saved contiguously in frame
ld: warning: object file (dscal.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: object file (dsmooth.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: could not create compact unwind for _med3r_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _split_: registers 23 and 24 not saved contiguously in frame
ld: warning: object file (idamax.o) was built for newer macOS version (12.4) than being linked (12.0)
ld: warning: object file (daxpy.o) was built for newer macOS version (12.4) than being linked (12.0)
installing to /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-CNAnorm/00new/CNAnorm/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNAnorm)