Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-01-14 11:08:01 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4159
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4055
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3997
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4114
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for mfa on riesling1


To the developers/maintainers of the mfa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mfa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1129/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mfa 1.17.0  (landing page)
Kieran Campbell
Snapshot Date: 2022-01-13 13:55:14 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/mfa
git_branch: master
git_last_commit: e1748c3
git_last_commit_date: 2021-10-26 12:36:01 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'Biobase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: mfa
Version: 1.17.0
Command: rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=mfa.buildbin-libdir mfa_1.17.0.tar.gz
StartedAt: 2022-01-13 21:13:47 -0500 (Thu, 13 Jan 2022)
EndedAt: 2022-01-13 21:15:18 -0500 (Thu, 13 Jan 2022)
EllapsedTime: 90.9 seconds
RetCode: 0
Status:   OK  
PackageFile: mfa_1.17.0.zip
PackageFileSize: 766.4 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=mfa.buildbin-libdir mfa_1.17.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'mfa' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c gibbs.cpp -o gibbs.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/mfa.buildbin-libdir/00LOCK-mfa/00new/mfa/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mfa'
    finding HTML links ... done
    calculate_chi                           html  
    create_synthetic                        html  
    cs_sigmoid                              html  
    empirical_lambda                        html  
    log_sum_exp                             html  
    map_branch                              html  
    mcmcify                                 html  
    mfa                                     html  
    plot_chi                                html  
    plot_dropout_relationship               html  
    plot_mfa_autocorr                       html  
    plot_mfa_trace                          html  
    posterior                               html  
    print.mfa                               html  
    summary.mfa                             html  
    to_ggmcmc                               html  
    transient                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'mfa' as mfa_1.17.0.zip
* DONE (mfa)