| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:24 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the spatzie package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/spatzie.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1849/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| spatzie 1.0.1 (landing page) Jennifer Hammelman
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: spatzie |
| Version: 1.0.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/spatzie_1.0.1.tar.gz && rm -rf spatzie.buildbin-libdir && mkdir spatzie.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=spatzie.buildbin-libdir spatzie_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL spatzie_1.0.1.zip && rm spatzie_1.0.1.tar.gz spatzie_1.0.1.zip |
| StartedAt: 2022-04-12 07:19:32 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:21:10 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 97.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/spatzie_1.0.1.tar.gz && rm -rf spatzie.buildbin-libdir && mkdir spatzie.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=spatzie.buildbin-libdir spatzie_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL spatzie_1.0.1.zip && rm spatzie_1.0.1.tar.gz spatzie_1.0.1.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
12 4302k 12 558k 0 0 1065k 0 0:00:04 --:--:-- 0:00:04 1066k
59 4302k 59 2558k 0 0 1681k 0 0:00:02 0:00:01 0:00:01 1681k
100 4302k 100 4302k 0 0 2026k 0 0:00:02 0:00:02 --:--:-- 2027k
install for i386
* installing *source* package 'spatzie' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'spatzie'
finding HTML links ... done
anchor_pair_enrich html
anchor_pair_example_count html
anchor_pair_example_match html
anchor_pair_example_score html
compare_motif_pairs html
compare_pairs_example html
filter_motifs html
filter_pair_motifs html
filter_pairs_example html
find_ep_coenrichment html
get_specific_interactions html
int_data_k562 html
int_data_mslcl html
int_data_yy1 html
interactions_yy1 html
interactions_yy1_enhancer html
interactions_yy1_ep html
interactions_yy1_promoter html
plot_motif_occurrence html
scan_interactions_example html
scan_interactions_example_filtered html
scan_motifs html
spatzie html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'spatzie' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'spatzie' as spatzie_1.0.1.zip
* DONE (spatzie)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'spatzie' successfully unpacked and MD5 sums checked