Multiple platform build/check report for BioC 3.14 - BUILD results for rDGIdb on machv2

Back to Multiple platform build/check report for BioC 3.14

[R]

This page was generated on 2022-04-13 12:08:37 -0400 (Wed, 13 Apr 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4324
tokay2	Windows Server 2012 R2 Standard	x64	4.1.3 (2022-03-10) -- "One Push-Up"	4077
machv2	macOS 10.14.6 Mojave	x86_64	4.1.3 (2022-03-10) -- "One Push-Up"	4137
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for rDGIdb on machv2

To the developers/maintainers of the rDGIdb package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rDGIdb.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

rDGIdb 1.20.0 (landing page)
Lars Bosshard

Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)

git_url: https://git.bioconductor.org/packages/rDGIdb

git_branch: RELEASE_3_14

git_last_commit: 043cfd6

git_last_commit_date: 2021-10-26 12:29:03 -0400 (Tue, 26 Oct 2021)

nebbiolo2

Linux (Ubuntu 20.04.4 LTS) / x86_64

tokay2

Windows Server 2012 R2 Standard / x64

machv2

macOS 10.14.6 Mojave / x86_64

ERROR

skipped

Summary

Package: rDGIdb

Version: 1.20.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rDGIdb

StartedAt: 2022-04-12 08:18:14 -0400 (Tue, 12 Apr 2022)

EndedAt: 2022-04-12 08:18:41 -0400 (Tue, 12 Apr 2022)

EllapsedTime: 26.1 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rDGIdb
###
##############################################################################
##############################################################################


* checking for file ‘rDGIdb/DESCRIPTION’ ... OK
* preparing ‘rDGIdb’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vignette.Rnw’ using knitr
Quitting from lines 108-112 (vignette.Rnw) 
Error: processing vignette 'vignette.Rnw' failed with diagnostics:
Oops, badly formatted query.
--- failed re-building ‘vignette.Rnw’

SUMMARY: processing the following file failed:
  ‘vignette.Rnw’

Error: Vignette re-building failed.
Execution halted