Mike Jiang
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/flowViz |
| git_branch: RELEASE_3_14 |
| git_last_commit: c9fba2a |
| git_last_commit_date: 2021-10-26 11:50:34 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:34 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the flowViz package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/flowViz.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 676/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| flowViz 1.58.0 (landing page) Mike Jiang
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: flowViz |
| Version: 1.58.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/flowViz_1.58.0.tar.gz && rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowViz.buildbin-libdir flowViz_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL flowViz_1.58.0.zip && rm flowViz_1.58.0.tar.gz flowViz_1.58.0.zip |
| StartedAt: 2022-04-12 04:40:40 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:43:17 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 156.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/flowViz_1.58.0.tar.gz && rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowViz.buildbin-libdir flowViz_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL flowViz_1.58.0.zip && rm flowViz_1.58.0.tar.gz flowViz_1.58.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
88 806k 88 715k 0 0 797k 0 0:00:01 --:--:-- 0:00:01 797k
100 806k 100 806k 0 0 642k 0 0:00:01 0:00:01 --:--:-- 643k
install for i386
* installing *source* package 'flowViz' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
in method for 'densityplot' with signature 'x="formula",data="view"': no definition for class "view"
in method for 'densityplot' with signature 'x="formula",data="ncdfFlowSet"': no definition for class "ncdfFlowSet"
in method for 'densityplot' with signature 'x="formula",data="ncdfFlowList"': no definition for class "ncdfFlowList"
in method for 'histogram' with signature 'x="formula",data="ncdfFlowSet"': no definition for class "ncdfFlowSet"
in method for 'histogram' with signature 'x="formula",data="ncdfFlowList"': no definition for class "ncdfFlowList"
in method for 'glines' with signature 'x="norm2Filter",data="ANY"': no definition for class "norm2Filter"
in method for 'glines' with signature 'x="norm2Filter",data="logicalFilterResult"': no definition for class "norm2Filter"
in method for 'glines' with signature 'x="norm2Filter",data="flowFrame"': no definition for class "norm2Filter"
in method for 'glpoints' with signature 'x="norm2Filter",data="flowFrame",channels="character"': no definition for class "norm2Filter"
in method for 'glpolygon' with signature 'x="norm2Filter",data="ANY"': no definition for class "norm2Filter"
in method for 'glpolygon' with signature 'x="norm2Filter",data="logicalFilterResult"': no definition for class "norm2Filter"
in method for 'glpolygon' with signature 'x="norm2Filter",data="flowFrame"': no definition for class "norm2Filter"
in method for 'gpoints' with signature 'x="norm2Filter",data="flowFrame",channels="character"': no definition for class "norm2Filter"
in method for 'gpolygon' with signature 'x="norm2Filter",data="ANY"': no definition for class "norm2Filter"
in method for 'gpolygon' with signature 'x="norm2Filter",data="logicalFilterResult"': no definition for class "norm2Filter"
in method for 'gpolygon' with signature 'x="norm2Filter",data="flowFrame"': no definition for class "norm2Filter"
in method for 'xyplot' with signature 'x="formula",data="view"': no definition for class "view"
in method for 'xyplot' with signature 'x="view",data="missing"': no definition for class "view"
in method for 'xyplot' with signature 'x="formula",data="gateView"': no definition for class "gateView"
in method for 'xyplot' with signature 'x="formula",data="ncdfFlowSet"': no definition for class "ncdfFlowSet"
in method for 'xyplot' with signature 'x="formula",data="ncdfFlowList"': no definition for class "ncdfFlowList"
** help
*** installing help indices
converting help for package 'flowViz'
finding HTML links ... done
addName-methods html
contour-methods html
densityplot html
dot-process_flowFrame_overlay html
dot-process_overlay_flowSet html
ecdfplot html
flowPlot html
flowViz-package html
flowViz.par.get html
glines-methods html
glpoints-methods html
glpolygon-methods html
gpoints-methods html
gpolygon-methods html
lattice-methods html
plot html
splom html
timeLinePlot html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/flowViz.buildbin-libdir/00LOCK-flowViz/00new/flowViz/help/timelineplot.html
xyplot html
** building package indices
** installing vignettes
'filters.Rmd'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'flowViz' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowViz' as flowViz_1.58.0.zip
* DONE (flowViz)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'flowViz' successfully unpacked and MD5 sums checked