Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:30 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for ensembldb on tokay2


To the developers/maintainers of the ensembldb package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ensembldb.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 584/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ensembldb 2.18.4  (landing page)
Johannes Rainer
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/ensembldb
git_branch: RELEASE_3_14
git_last_commit: 0c7105f
git_last_commit_date: 2022-03-22 13:15:17 -0400 (Tue, 22 Mar 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ensembldb
Version: 2.18.4
Command: rm -rf ensembldb.buildbin-libdir && mkdir ensembldb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ensembldb.buildbin-libdir ensembldb_2.18.4.tar.gz
StartedAt: 2022-04-13 06:08:38 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:11:22 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 163.6 seconds
RetCode: 0
Status:   OK  
PackageFile: ensembldb_2.18.4.zip
PackageFileSize: 3.407 MiB

Command output

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###
### Running command:
###
###   rm -rf ensembldb.buildbin-libdir && mkdir ensembldb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ensembldb.buildbin-libdir ensembldb_2.18.4.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'ensembldb' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ensembldb'
    finding HTML links ... done
    Deprecated                              html  
    EnsDb-AnnotationDbi                     html  
    EnsDb-class                             html  
    EnsDb-exonsBy                           html  
    finding level-2 HTML links ... done

    EnsDb-lengths                           html  
    EnsDb-seqlevels                         html  
    EnsDb-sequences                         html  
    EnsDb-utils                             html  
    EnsDb                                   html  
    Filter-classes                          html  
    ProteinFunctionality                    html  
    cdsToTranscript                         html  
    convertFilter                           html  
    genomeToProtein                         html  
    genomeToTranscript                      html  
    global-filters                          html  
    hasProteinData-EnsDb-method             html  
    listEnsDbs                              html  
    makeEnsemblDbPackage                    html  
    proteinToGenome                         html  
    proteinToTranscript                     html  
    runEnsDbApp                             html  
    transcriptToCds                         html  
    transcriptToGenome                      html  
    transcriptToProtein                     html  
    useMySQL-EnsDb-method                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ensembldb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ensembldb' as ensembldb_2.18.4.zip
* DONE (ensembldb)