| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:29 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the easyRNASeq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/easyRNASeq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 556/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| easyRNASeq 2.30.0 (landing page) Nicolas Delhomme
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK |  | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: easyRNASeq |
| Version: 2.30.0 |
| Command: rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.30.0.tar.gz |
| StartedAt: 2022-04-13 06:06:41 -0400 (Wed, 13 Apr 2022) |
| EndedAt: 2022-04-13 06:08:47 -0400 (Wed, 13 Apr 2022) |
| EllapsedTime: 125.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: easyRNASeq_2.30.0.zip |
| PackageFileSize: 24.14 MiB |
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### Running command:
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### rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.30.0.tar.gz
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install for i386
* installing *source* package 'easyRNASeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'BiocGenerics' for request: 'clusterApply' when loading 'easyRNASeq'
Creating a generic function for 'basename' from package 'base' in package 'easyRNASeq'
Creating a generic function for 'file.exists' from package 'base' in package 'easyRNASeq'
** help
*** installing help indices
converting help for package 'easyRNASeq'
finding HTML links ... done
BiocFileCache-methods html
finding level-2 HTML links ... done
GenomicRanges-methods html
IRanges-methods html
Rsamtools-methods html
ShortRead-methods html
basename-methods html
easyRNASeq-AnnotParam-accessors html
easyRNASeq-AnnotParam-class html
easyRNASeq-AnnotParam html
easyRNASeq-BamFileList html
easyRNASeq-BamParam-accessors html
easyRNASeq-BamParam-class html
easyRNASeq-BamParam html
easyRNASeq-RnaSeqParam-accessors html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/easyRNASeq.buildbin-libdir/00LOCK-easyRNASeq/00new/easyRNASeq/help/bamParam.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/easyRNASeq.buildbin-libdir/00LOCK-easyRNASeq/00new/easyRNASeq/help/annotParam.html
easyRNASeq-RnaSeqParam-class html
easyRNASeq-RnaSeqParam html
easyRNASeq-accessors html
easyRNASeq-annotation-internal-methods
html
easyRNASeq-annotation-methods html
easyRNASeq-class html
easyRNASeq-correction-methods html
easyRNASeq-coverage-methods html
easyRNASeq-datasets html
easyRNASeq-defunct-annotation-methods html
easyRNASeq-defunct html
easyRNASeq-easyRNASeq html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/easyRNASeq.buildbin-libdir/00LOCK-easyRNASeq/00new/easyRNASeq/help/easyRNASeq-defunct.html
easyRNASeq-global-variables html
easyRNASeq-internal-AnnotParam-methods
html
easyRNASeq-internal-methods html
easyRNASeq-island-methods html
easyRNASeq-package html
easyRNASeq-simpleRNASeq html
easyRNASeq-summarization-internal-methods
html
easyRNASeq-summarization-methods html
easyRNASeq-synthetic-transcripts html
edgeR-methods html
file.exists-methods html
genomeIntervals-methods html
parallel-methods html
print-methods html
show-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'BiocGenerics' for request: 'clusterApply' when loading 'easyRNASeq'
** testing if installed package can be loaded from final location
No methods found in package 'BiocGenerics' for request: 'clusterApply' when loading 'easyRNASeq'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'easyRNASeq' ...
** testing if installed package can be loaded
No methods found in package 'BiocGenerics' for request: 'clusterApply' when loading 'easyRNASeq'
* MD5 sums
packaged installation of 'easyRNASeq' as easyRNASeq_2.30.0.zip
* DONE (easyRNASeq)