Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:20 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for circRNAprofiler on tokay2


To the developers/maintainers of the circRNAprofiler package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/circRNAprofiler.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 321/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
circRNAprofiler 1.8.0  (landing page)
Simona Aufiero
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/circRNAprofiler
git_branch: RELEASE_3_14
git_last_commit: 92fcc06
git_last_commit_date: 2021-10-26 12:53:01 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: circRNAprofiler
Version: 1.8.0
Command: rm -rf circRNAprofiler.buildbin-libdir && mkdir circRNAprofiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=circRNAprofiler.buildbin-libdir circRNAprofiler_1.8.0.tar.gz
StartedAt: 2022-04-13 05:52:17 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 05:53:53 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 96.5 seconds
RetCode: 0
Status:   OK  
PackageFile: circRNAprofiler_1.8.0.zip
PackageFileSize: 3.412 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf circRNAprofiler.buildbin-libdir && mkdir circRNAprofiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=circRNAprofiler.buildbin-libdir circRNAprofiler_1.8.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'circRNAprofiler' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'circRNAprofiler'
    finding HTML links ... done
    ahChainFiles                            html  
    ahRepeatMasker                          html  
    annotateBSJs                            html  
    annotateRepeats                         html  
    finding level-2 HTML links ... done

    annotateSNPsGWAS                        html  
    attractSpecies                          html  
    backSplicedJunctions                    html  
    checkProjectFolder                      html  
    filterCirc                              html  
    formatGTF                               html  
    getBackSplicedJunctions                 html  
    getCircSeqs                             html  
    getDeseqRes                             html  
    getDetectionTools                       html  
    getEdgerRes                             html  
    getMiRsites                             html  
    getMotifs                               html  
    getRandomBSJunctions                    html  
    getRegexPattern                         html  
    getSeqsAcrossBSJs                       html  
    getSeqsFromGRs                          html  
    gtf                                     html  
    gwasTraits                              html  
    importCircExplorer2                     html  
    importCircMarker                        html  
    importKnife                             html  
    importMapSplice                         html  
    importNCLscan                           html  
    importOther                             html  
    importUroborus                          html  
    initCircRNAprofiler                     html  
    iupac                                   html  
    liftBSJcoords                           html  
    memeDB                                  html  
    mergeBSJunctions                        html  
    mergeMotifs                             html  
    mergedBSJunctions                       html  
    miRspeciesCodes                         html  
    plotExBetweenBSEs                       html  
    plotExPosition                          html  
    plotHostGenes                           html  
    plotLenBSEs                             html  
    plotLenIntrons                          html  
    plotMiR                                 html  
    plotMotifs                              html  
    plotTotExons                            html  
    rearrangeMiRres                         html  
    volcanoPlot                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'circRNAprofiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'circRNAprofiler' as circRNAprofiler_1.8.0.zip
* DONE (circRNAprofiler)