Yi Zhou
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/brendaDb |
| git_branch: RELEASE_3_14 |
| git_last_commit: 61bce49 |
| git_last_commit_date: 2021-10-26 12:53:39 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:16 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the brendaDb package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/brendaDb.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 215/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| brendaDb 1.8.0 (landing page) Yi Zhou
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: brendaDb |
| Version: 1.8.0 |
| Command: rm -rf brendaDb.buildbin-libdir && mkdir brendaDb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=brendaDb.buildbin-libdir brendaDb_1.8.0.tar.gz |
| StartedAt: 2022-04-13 05:44:47 -0400 (Wed, 13 Apr 2022) |
| EndedAt: 2022-04-13 05:45:27 -0400 (Wed, 13 Apr 2022) |
| EllapsedTime: 39.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: brendaDb_1.8.0.zip |
| PackageFileSize: 1.43 MiB |
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### Running command:
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### rm -rf brendaDb.buildbin-libdir && mkdir brendaDb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=brendaDb.buildbin-libdir brendaDb_1.8.0.tar.gz
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install for i386
* installing *source* package 'brendaDb' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c read_brenda.cpp -o read_brenda.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o brendaDb.dll tmp.def RcppExports.o read_brenda.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/brendaDb.buildbin-libdir/00LOCK-brendaDb/00new/brendaDb/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'brendaDb'
finding HTML links ... done
BiocycPathwayEnzymes html
BiocycPathwayGenes html
CleanECNumber html
ConfigBPCores html
DownloadBrenda html
ExtractField html
ID2Enzyme html
InitBrendaDeprecatedEntry html
InitBrendaEntry html
ParseGeneric html
ParseNoDescription html
ParseProtein html
ParseProteinNum html
ParseReaction html
ParseRecommendedName html
ParseReference html
ParseSystematicName html
PrettyPrintBrendaEntry html
PrintTreeHelper html
QueryBrenda html
QueryBrendaBase html
ReadBrenda html
ReadBrendaFile html
SelectOrganism html
SeparateEntries html
SeparateSubentries html
ShowFields html
acronyms html
brendaDb-package html
print.brenda.entries html
print.brenda.entry html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'brendaDb' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c read_brenda.cpp -o read_brenda.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o brendaDb.dll tmp.def RcppExports.o read_brenda.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/brendaDb.buildbin-libdir/brendaDb/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'brendaDb' as brendaDb_1.8.0.zip
* DONE (brendaDb)