| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:30 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the ToxicoGx package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ToxicoGx.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1975/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ToxicoGx 1.4.0 (landing page) Benjamin Haibe-Kains
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ToxicoGx |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ToxicoGx_1.4.0.tar.gz && rm -rf ToxicoGx.buildbin-libdir && mkdir ToxicoGx.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ToxicoGx.buildbin-libdir ToxicoGx_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ToxicoGx_1.4.0.zip && rm ToxicoGx_1.4.0.tar.gz ToxicoGx_1.4.0.zip |
| StartedAt: 2022-04-12 06:11:38 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:13:19 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 100.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ToxicoGx_1.4.0.tar.gz && rm -rf ToxicoGx.buildbin-libdir && mkdir ToxicoGx.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ToxicoGx.buildbin-libdir ToxicoGx_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ToxicoGx_1.4.0.zip && rm ToxicoGx_1.4.0.tar.gz ToxicoGx_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
22 4147k 22 923k 0 0 1224k 0 0:00:03 --:--:-- 0:00:03 1223k
73 4147k 73 3059k 0 0 1755k 0 0:00:02 0:00:01 0:00:01 1755k
100 4147k 100 4147k 0 0 1960k 0 0:00:02 0:00:02 --:--:-- 1961k
install for i386
* installing *source* package 'ToxicoGx' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ToxicoGx'
finding HTML links ... done
HCC_sig html
TGGATESsmall html
ToxicoSet-class html
ToxicoSet html
ToxicoSig html
annotation-set html
annotation html
availableTSets html
checkTSetStructure html
computeAUC html
computeICn html
computeLimmaDiffExpr-ToxicoSet-method html
computeLimmaDiffExpr html
curation-set html
curation html
datasetType-set html
datasetType html
dim-ToxicoSet-method html
downloadTSet html
drugGeneResponseCurve html
drugInfo-set html
drugInfo html
drugNames-set html
drugNames html
drugPerturbationSig html
drugTimeResponseCurve html
geneDrugPerturbation html
logLogisticRegression html
mDataNames-ToxicoSet-method html
name-ToxicoSet-method html
sensitivityRaw-set html
sensitivityRaw html
sensitivitySlot-set html
sensitivitySlot html
show-ToxicoSet-method html
show-ToxicoSig-method html
showSigAnnot html
sub-ToxicoSet-ANY-ANY-ANY-method html
subsetTo html
summarizeMolecularProfiles html
summarizeSensitivityProfiles html
updateCellId html
updateDrugId html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ToxicoGx' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ToxicoGx' as ToxicoGx_1.4.0.zip
* DONE (ToxicoGx)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ToxicoGx' successfully unpacked and MD5 sums checked