Back to Multiple platform build/check report for BioC 3.14
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:36 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for GeneRegionScan on tokay2


To the developers/maintainers of the GeneRegionScan package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneRegionScan.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 732/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneRegionScan 1.50.0  (landing page)
Lasse Folkersen
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/GeneRegionScan
git_branch: RELEASE_3_14
git_last_commit: 15c71ee
git_last_commit_date: 2021-10-26 11:53:49 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GeneRegionScan
Version: 1.50.0
Command: rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.50.0.tar.gz
StartedAt: 2022-04-13 06:17:40 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:18:24 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 44.3 seconds
RetCode: 0
Status:   OK  
PackageFile: GeneRegionScan_1.50.0.zip
PackageFileSize: 7.67 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.50.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'GeneRegionScan' ...
** using staged installation
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeneRegionScan'
    finding HTML links ... done
    Nondocumented-objects                   html  
    ProbeLevelSet-class                     html  
    addSnpPdata                             html  
    checkForFileInPath                      html  
    doProbeLinear                           html  
    doProbeTTest                            html  
    exampleProbeLevelSet                    html  
    excludeDoubleMatchingProbes             html  
    exonStructure                           html  
    findProbePositions                      html  
    findSequenceInGenome                    html  
    geneRegionScan                          html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/GeneRegionScan.buildbin-libdir/00LOCK-GeneRegionScan/00new/GeneRegionScan/help/GeneRegionScan.html
    genomic                                 html  
    getLocalMetaprobeIntensities            html  
    getLocalProbeIntensities                html  
    getMetaprobesetsFromRegionOfInterest    html  
    getProbeLevelAnnotationForExonArrays    html  
    getProbesetsFromMetaprobeset            html  
    getProbesetsFromRegionOfInterest        html  
    getSequence                             html  
    getServerProbeIntensities               html  
    mrna                                    html  
    plotCoexpression                        html  
    plotOnGene                              html  
    plotStatistics                          html  
    readGeneInput                           html  
    translateSampleNames                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GeneRegionScan' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneRegionScan' as GeneRegionScan_1.50.0.zip
* DONE (GeneRegionScan)