| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:18 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the recount package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/recount.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1541/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| recount 1.18.1 (landing page) Leonardo Collado-Torres
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: recount |
| Version: 1.18.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/recount_1.18.1.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL recount_1.18.1.zip && rm recount_1.18.1.tar.gz recount_1.18.1.zip |
| StartedAt: 2021-10-14 10:31:34 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:33:31 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 117.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/recount_1.18.1.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL recount_1.18.1.zip && rm recount_1.18.1.tar.gz recount_1.18.1.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
19 5805k 19 1129k 0 0 2244k 0 0:00:02 --:--:-- 0:00:02 2245k
99 5805k 99 5749k 0 0 3845k 0 0:00:01 0:00:01 --:--:-- 3845k
100 5805k 100 5805k 0 0 3854k 0 0:00:01 0:00:01 --:--:-- 3855k
install for i386
* installing *source* package 'recount' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'recount'
finding HTML links ... done
abstract_search html
add_metadata html
add_predictions html
all_metadata html
browse_study html
coverage_matrix html
download_retry html
download_study html
expressed_regions html
find_geo html
geo_characteristics html
geo_info html
getRPKM html
getTPM html
read_counts html
recount-package html
recount_abstract html
recount_exons html
recount_genes html
recount_url html
reproduce_ranges html
rse_gene_SRP009615 html
scale_counts html
snaptron_query html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'recount' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'recount' as recount_1.18.1.zip
* DONE (recount)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'recount' successfully unpacked and MD5 sums checked