Jack Gisby
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/packFinder |
| git_branch: RELEASE_3_13 |
| git_last_commit: a750a91 |
| git_last_commit_date: 2021-05-19 12:48:53 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:15 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the packFinder package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/packFinder.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1333/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| packFinder 1.4.0 (landing page) Jack Gisby
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: packFinder |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/packFinder_1.4.0.tar.gz && rm -rf packFinder.buildbin-libdir && mkdir packFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=packFinder.buildbin-libdir packFinder_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL packFinder_1.4.0.zip && rm packFinder_1.4.0.tar.gz packFinder_1.4.0.zip |
| StartedAt: 2021-10-14 07:44:25 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 07:45:14 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 49.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/packFinder_1.4.0.tar.gz && rm -rf packFinder.buildbin-libdir && mkdir packFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=packFinder.buildbin-libdir packFinder_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL packFinder_1.4.0.zip && rm packFinder_1.4.0.tar.gz packFinder_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 873k 5 45689 0 0 290k 0 0:00:03 --:--:-- 0:00:03 289k
100 873k 100 873k 0 0 2832k 0 --:--:-- --:--:-- --:--:-- 2834k
install for i386
* installing *source* package 'packFinder' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'packFinder'
finding HTML links ... done
arabidopsisThalianaRefseq html
blastAnalysis html
blastAnnotate html
collapseSeqs html
filterWildcards html
getPackSeqs html
getPacksFromCsv html
getPacksFromFasta html
getPacksFromGRanges html
getTsds html
identifyPotentialPackElements html
identifyTirMatches html
makeBlastDb html
packAlign html
packBlast html
packClust html
packFinder html
packMatches html
packSearch html
packsToCsv html
packsToFasta html
packsToGRanges html
readBlast html
readUc html
tirClust html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'packFinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'packFinder' as packFinder_1.4.0.zip
* DONE (packFinder)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'packFinder' successfully unpacked and MD5 sums checked