Paul Shannon
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/igvR |
| git_branch: RELEASE_3_13 |
| git_last_commit: 947368f |
| git_last_commit_date: 2021-05-19 12:35:21 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:08 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the igvR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igvR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 906/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| igvR 1.12.0 (landing page) Paul Shannon
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: igvR |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/igvR_1.12.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL igvR_1.12.0.zip && rm igvR_1.12.0.tar.gz igvR_1.12.0.zip |
| StartedAt: 2021-10-14 10:37:46 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:39:34 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 108.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/igvR_1.12.0.tar.gz && rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=igvR.buildbin-libdir igvR_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL igvR_1.12.0.zip && rm igvR_1.12.0.tar.gz igvR_1.12.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
37 8457k 37 3197k 0 0 3248k 0 0:00:02 --:--:-- 0:00:02 3249k
99 8457k 99 8442k 0 0 4254k 0 0:00:01 0:00:01 --:--:-- 4255k
100 8457k 100 8457k 0 0 4261k 0 0:00:01 0:00:01 --:--:-- 4260k
install for i386
* installing *source* package 'igvR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
See system.file("LICENSE", package="MotifDb") for use restrictions.
** help
*** installing help indices
converting help for package 'igvR'
finding HTML links ... done
BedpeInteractionsTrack-class html
DataFrameAnnotationTrack-class html
DataFrameQuantitativeTrack-class html
GRangesAnnotationTrack-class html
GRangesQuantitativeTrack-class html
GenomicAlignmentTrack-class html
QuantitativeTrack-class html
Track-class html
UCSCBedAnnotationTrack-class html
UCSCBedGraphQuantitativeTrack-class html
VariantTrack-class html
displayTrack html
enableMotifLogoPopups html
getGenomicRegion html
getSupportedGenomes html
getTrackNames html
igvAnnotationTrack-class html
igvR-class html
ping html
removeTracksByName html
saveToSVG html
setCustomGenome html
setGenome html
setTrackClickFunction html
showGenomicRegion html
trackInfo html
trackSize-BedpeInteractionsTrack-method
html
trackSize-DataFrameAnnotationTrack-method
html
trackSize-DataFrameQuantitativeTrack-method
html
trackSize-GRangesAnnotationTrack-method
html
trackSize-GRangesQuantitativeTrack-method
html
trackSize-GenomicAlignmentTrack-method
html
trackSize-UCSCBedAnnotationTrack-method
html
trackSize-UCSCBedGraphQuantitativeTrack-method
html
trackSize-VariantTrack-method html
trackSize html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package can be loaded from final location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'igvR' ...
** testing if installed package can be loaded
See system.file("LICENSE", package="MotifDb") for use restrictions.
* MD5 sums
packaged installation of 'igvR' as igvR_1.12.0.zip
* DONE (igvR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'igvR' successfully unpacked and MD5 sums checked