VJ Carey
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/hmdbQuery |
| git_branch: RELEASE_3_13 |
| git_last_commit: c26d2ce |
| git_last_commit_date: 2021-07-28 17:03:44 -0400 (Wed, 28 Jul 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:08 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the hmdbQuery package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/hmdbQuery.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 870/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| hmdbQuery 1.12.1 (landing page) VJ Carey
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: hmdbQuery |
| Version: 1.12.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/hmdbQuery_1.12.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.12.1.zip && rm hmdbQuery_1.12.1.tar.gz hmdbQuery_1.12.1.zip |
| StartedAt: 2021-10-14 07:27:08 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 07:28:28 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 80.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/hmdbQuery_1.12.1.tar.gz && rm -rf hmdbQuery.buildbin-libdir && mkdir hmdbQuery.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=hmdbQuery.buildbin-libdir hmdbQuery_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL hmdbQuery_1.12.1.zip && rm hmdbQuery_1.12.1.tar.gz hmdbQuery_1.12.1.zip
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install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'hmdbQuery/vignettes/hmdbQuery.Rmd' to 'hmdbQuery/README.md'
* installing *source* package 'hmdbQuery' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'hmdbQuery'
finding HTML links ... done
HmdbEntry-class html
HmdbEntry html
biospecimens-HmdbEntry-method html
diseases-HmdbEntry-method html
hmdb1 html
hmdb_disease html
hmdb_gene html
hmdb_omim html
hmdb_protein html
store-HmdbEntry-method html
tissues-HmdbEntry-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'hmdbQuery/vignettes/hmdbQuery.Rmd' to 'hmdbQuery/README.md'
* installing *source* package 'hmdbQuery' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'hmdbQuery' as hmdbQuery_1.12.1.zip
* DONE (hmdbQuery)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'hmdbQuery' successfully unpacked and MD5 sums checked