Back to Multiple platform build/check report for BioC 3.13
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This page was generated on 2021-10-15 15:06:01 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for compcodeR on tokay2

To the developers/maintainers of the compcodeR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/compcodeR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 369/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
compcodeR 1.28.0  (landing page)
Charlotte Soneson
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/compcodeR
git_branch: RELEASE_3_13
git_last_commit: 16b062e
git_last_commit_date: 2021-05-19 12:04:43 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: compcodeR
Version: 1.28.0
Command: rm -rf compcodeR.buildbin-libdir && mkdir compcodeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compcodeR.buildbin-libdir compcodeR_1.28.0.tar.gz
StartedAt: 2021-10-15 08:41:57 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 08:43:17 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 80.6 seconds
RetCode: 0
Status:   OK  
PackageFile: compcodeR_1.28.0.zip
PackageFileSize: 1.938 MiB

Command output

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###
### Running command:
###
###   rm -rf compcodeR.buildbin-libdir && mkdir compcodeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compcodeR.buildbin-libdir compcodeR_1.28.0.tar.gz
###
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install for i386

* installing *source* package 'compcodeR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'compcodeR'
    finding HTML links ... done
    DESeq2.createRmd                        html  
    DSS.createRmd                           html  
    EBSeq.createRmd                         html  
    NBPSeq.createRmd                        html  
    NOISeq.prenorm.createRmd                html  
    TCC.createRmd                           html  
    baySeq.createRmd                        html  
    checkDataObject                         html  
    checkTableConsistency                   html  
    check_compData                          html  
    check_compData_results                  html  
    compData-class                          html  
    compData                                html  
    compcodeR-package                       html  
    convertListTocompData                   html  
    convertcompDataToList                   html  
    edgeR.GLM.createRmd                     html  
    edgeR.exact.createRmd                   html  
    generateCodeHTMLs                       html  
    generateSyntheticData                   html  
    listcreateRmd                           html  
    logcpm.limma.createRmd                  html  
    runComparison                           html  
    runComparisonGUI                        html  
    runDiffExp                              html  
    show-compData-method                    html  
    sqrtcpm.limma.createRmd                 html  
    summarizeSyntheticDataSet               html  
    ttest.createRmd                         html  
    voom.limma.createRmd                    html  
    voom.ttest.createRmd                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'compcodeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'compcodeR' as compcodeR_1.28.0.zip
* DONE (compcodeR)