Back to Multiple platform build/check report for BioC 3.13
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This page was generated on 2021-10-15 15:05:59 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for caOmicsV on tokay2

To the developers/maintainers of the caOmicsV package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/caOmicsV.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 240/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
caOmicsV 1.22.0  (landing page)
Henry Zhang
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/caOmicsV
git_branch: RELEASE_3_13
git_last_commit: a570ed1
git_last_commit_date: 2021-05-19 12:14:02 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: caOmicsV
Version: 1.22.0
Command: rm -rf caOmicsV.buildbin-libdir && mkdir caOmicsV.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=caOmicsV.buildbin-libdir caOmicsV_1.22.0.tar.gz
StartedAt: 2021-10-15 08:24:32 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 08:25:56 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 84.8 seconds
RetCode: 0
Status:   OK  
PackageFile: caOmicsV_1.22.0.zip
PackageFileSize: 2.957 MiB

Command output

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###
### Running command:
###
###   rm -rf caOmicsV.buildbin-libdir && mkdir caOmicsV.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=caOmicsV.buildbin-libdir caOmicsV_1.22.0.tar.gz
###
##############################################################################
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install for i386

* installing *source* package 'caOmicsV' ...
** using staged installation
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'caOmicsV'
    finding HTML links ... done
    CA_OMICS_ENV                            html  
    CA_OMICS_NAME                           html  
    CA_OMICS_NA_STRING                      html  
    CNVDemoData                             html  
    RNA2miRNA                               html  
    RNASeq                                  html  
    RNASeqDemoData                          html  
    bioMatrixLegend                         html  
    bioNetCircosPlot                        html  
    bioNetLegend                            html  
    biomatrixPlotDemoData                   html  
    bionetPlotDemoData                      html  
    caOmicsV-package                        html  
    convertToZScores                        html  
    drawBioNetNodeBackground                html  
    eraseBioNetNode                         html  
    getBezierCurve                          html  
    getBioMatrixDataRowTop                  html  
    getBioMatrixPlotParameters              html  
    getBioNetNodeLinkLine                   html  
    getBioNetParameters                     html  
    getBioNetPlotLocations                  html  
    getBioNetSamplePlotPosition             html  
    getCaOmicsVColors                       html  
    getCaOmicsVPlotTypes                    html  
    getDefaultNaStrings                     html  
    getHeatmapColorScales                   html  
    getPlotDataSet                          html  
    getPlotOmicsData                        html  
    getPlotSampleData                       html  
    getPlotSummaryData                      html  
    getRelatedPlotData                      html  
    initializeBioMatrixPlot                 html  
    initializeBioNetCircos                  html  
    labelBioNetNodeNames                    html  
    linkBioNetNodes                         html  
    linkBioNetSamples                       html  
    methylDemoData                          html  
    miRNA                                   html  
    miRNADemoData                           html  
    plotBioMatrix                           html  
    plotBioMatrixBars                       html  
    plotBioMatrixBinaryData                 html  
    plotBioMatrixCategoryData               html  
    plotBioMatrixHeatmap                    html  
    plotBioMatrixRowNames                   html  
    plotBioMatrixSampleData                 html  
    plotBioMatrixSampleNames                html  
    plotBioNetBars                          html  
    plotBioNetCircos                        html  
    plotBioNetHeatmap                       html  
    plotBioNetLines                         html  
    plotBioNetPoints                        html  
    plotBioNetPolygons                      html  
    plotHeatmapColorScale                   html  
    resetBioNetNodePlotAreaBoundary         html  
    sampleDemoData                          html  
    setBioMatrixBaseCoordinates             html  
    setBioMatrixPlotArea                    html  
    setBioMatrixPlotParameters              html  
    setBioNetCircosBasePlotPositions        html  
    setBioNetNodeLayout                     html  
    setBioNetPlotAreaBackground             html  
    setBioNetPlotParameters                 html  
    setCaOmicsVColors                       html  
    setDefaultNaStrings                     html  
    showBioMatrixPlotLayout                 html  
    showBioNetNodesLayout                   html  
    showSupportedBioNetCircosPlotType       html  
    sortClinicalData                        html  
    sortOmicsDataByColumn                   html  
    sortOmicsDataByRow                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'caOmicsV' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'caOmicsV' as caOmicsV_1.22.0.zip
* DONE (caOmicsV)