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This page was generated on 2021-10-15 15:05:58 -0400 (Fri, 15 Oct 2021).

INSTALL results for biomaRt on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomaRt.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 180/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomaRt 2.48.3  (landing page)
Mike Smith
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/biomaRt
git_branch: RELEASE_3_13
git_last_commit: 66a592e
git_last_commit_date: 2021-08-12 09:34:37 -0400 (Thu, 12 Aug 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: biomaRt
Version: 2.48.3
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/biomaRt_2.48.3.tar.gz && rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.48.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL biomaRt_2.48.3.zip && rm biomaRt_2.48.3.tar.gz biomaRt_2.48.3.zip
StartedAt: 2021-10-14 08:09:54 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 08:10:54 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 60.6 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/biomaRt_2.48.3.tar.gz && rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.48.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL biomaRt_2.48.3.zip && rm biomaRt_2.48.3.tar.gz biomaRt_2.48.3.zip
###
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 12  120k   12 15989    0     0   133k      0 --:--:-- --:--:-- --:--:--  133k
100  120k  100  120k    0     0   626k      0 --:--:-- --:--:-- --:--:--  628k

install for i386

* installing *source* package 'biomaRt' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biomaRt'
    finding HTML links ... done
    Mart-class                              html  
    NP2009code                              html  
    attributePages                          html  
    biomaRt-deprecated                      html  
    biomartCache                            html  
    exportFASTA                             html  
    filterType                              html  
    getBM                                   html  
    getGene                                 html  
    getLDS                                  html  
    getSequence                             html  
    listAttributes                          html  
    listDatasets                            html  
    listEnsembl                             html  
    listEnsemblArchives                     html  
    listFilterValues                        html  
    listFilters                             html  
    listMarts                               html  
    select                                  html  
    useDataset                              html  
    useEnsembl                              html  
    useMart                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomaRt' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomaRt' as biomaRt_2.48.3.zip
* DONE (biomaRt)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'biomaRt' successfully unpacked and MD5 sums checked