Michael Love
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/alpine |
| git_branch: RELEASE_3_13 |
| git_last_commit: 06257d2 |
| git_last_commit_date: 2021-05-19 12:22:33 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:57 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the alpine package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/alpine.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 46/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| alpine 1.18.0 (landing page) Michael Love
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: alpine |
| Version: 1.18.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/alpine_1.18.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL alpine_1.18.0.zip && rm alpine_1.18.0.tar.gz alpine_1.18.0.zip |
| StartedAt: 2021-10-14 10:23:19 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:24:17 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 57.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/alpine_1.18.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL alpine_1.18.0.zip && rm alpine_1.18.0.tar.gz alpine_1.18.0.zip
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install for i386
* installing *source* package 'alpine' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'alpine'
finding HTML links ... done
alpine-package html
buildFragtypes html
estimateAbundance html
extractAlpine html
fitBiasModels html
getFragmentWidths html
getReadLength html
mergeGenes html
normalizeDESeq html
plotFragLen html
plotGC html
plotGRL html
plotOrder0 html
plotRelPos html
predictCoverage html
preprocessedData html
splitGenesAcrossChroms html
splitLongGenes html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'alpine' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'alpine' as alpine_1.18.0.zip
* DONE (alpine)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'alpine' successfully unpacked and MD5 sums checked