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This page was generated on 2021-10-15 15:06:19 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for RJMCMCNucleosomes on tokay2

To the developers/maintainers of the RJMCMCNucleosomes package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RJMCMCNucleosomes.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1590/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RJMCMCNucleosomes 1.16.0  (landing page)
Astrid Deschênes
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/RJMCMCNucleosomes
git_branch: RELEASE_3_13
git_last_commit: ff26964
git_last_commit_date: 2021-05-19 12:25:12 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RJMCMCNucleosomes
Version: 1.16.0
Command: rm -rf RJMCMCNucleosomes.buildbin-libdir && mkdir RJMCMCNucleosomes.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RJMCMCNucleosomes.buildbin-libdir RJMCMCNucleosomes_1.16.0.tar.gz
StartedAt: 2021-10-15 11:25:35 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 11:27:48 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 132.5 seconds
RetCode: 0
Status:   OK  
PackageFile: RJMCMCNucleosomes_1.16.0.zip
PackageFileSize: 1.471 MiB

Command output

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###
### Running command:
###
###   rm -rf RJMCMCNucleosomes.buildbin-libdir && mkdir RJMCMCNucleosomes.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RJMCMCNucleosomes.buildbin-libdir RJMCMCNucleosomes_1.16.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'RJMCMCNucleosomes' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c NucleoDirichlet.cpp -o NucleoDirichlet.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c NucleoDirichletPA.cpp -o NucleoDirichletPA.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Nucleosome.cpp -o Nucleosome.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c RJMCMCNucleosomes_init.c -o RJMCMCNucleosomes_init.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c SegmentSeq.cpp -o SegmentSeq.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/i386/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c rjmcmcNucleo.cpp -o rjmcmcNucleo.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RJMCMCNucleosomes.dll tmp.def NucleoDirichlet.o NucleoDirichletPA.o Nucleosome.o RJMCMCNucleosomes_init.o RcppExports.o SegmentSeq.o rjmcmcNucleo.o -L/i386/lib -lgsl -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/RJMCMCNucleosomes.buildbin-libdir/00LOCK-RJMCMCNucleosomes/00new/RJMCMCNucleosomes/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RJMCMCNucleosomes'
    finding HTML links ... done
    RJMCMCNucleosomes-package               html  
    RJMCMC_result                           html  
    mergeAllRDSFiles                        html  
    mergeAllRDSFilesFromDirectory           html  
    mergeRDSFiles                           html  
    plotNucleosomes                         html  
    postMerge                               html  
    postTreatment                           html  
    print.rjmcmcNucleosomes                 html  
    print.rjmcmcNucleosomesBeforeAndAfterPostTreatment
                                            html  
    print.rjmcmcNucleosomesMerge            html  
    reads_demo_01                           html  
    reads_demo_02                           html  
    rjmcmc                                  html  
    rjmcmcCHR                               html  
    rjmcmcNucleo                            html  
    runCHR                                  html  
    segmentation                            html  
    syntheticNucleosomeReads                html  
    validateDirectoryParameters             html  
    validatePlotNucleosomesParameters       html  
    validatePrepMergeParameters             html  
    validateRDSFilesParameters              html  
    validateRJMCMCParameters                html  
    validateSegmentationParameters          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RJMCMCNucleosomes' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c NucleoDirichlet.cpp -o NucleoDirichlet.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c NucleoDirichletPA.cpp -o NucleoDirichletPA.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Nucleosome.cpp -o Nucleosome.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c RJMCMCNucleosomes_init.c -o RJMCMCNucleosomes_init.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c SegmentSeq.cpp -o SegmentSeq.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I/x64/include -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c rjmcmcNucleo.cpp -o rjmcmcNucleo.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RJMCMCNucleosomes.dll tmp.def NucleoDirichlet.o NucleoDirichletPA.o Nucleosome.o RJMCMCNucleosomes_init.o RcppExports.o SegmentSeq.o rjmcmcNucleo.o -L/x64/lib -lgsl -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/RJMCMCNucleosomes.buildbin-libdir/RJMCMCNucleosomes/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RJMCMCNucleosomes' as RJMCMCNucleosomes_1.16.0.zip
* DONE (RJMCMCNucleosomes)