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This page was generated on 2021-10-15 15:06:13 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for MSGFplus on tokay2

To the developers/maintainers of the MSGFplus package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSGFplus.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1199/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSGFplus 1.26.0  (landing page)
Thomas Lin Pedersen
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/MSGFplus
git_branch: RELEASE_3_13
git_last_commit: c0c3ae3
git_last_commit_date: 2021-05-19 12:08:05 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: MSGFplus
Version: 1.26.0
Command: rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.26.0.tar.gz
StartedAt: 2021-10-15 10:33:17 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 10:34:44 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 86.6 seconds
RetCode: 0
Status:   OK  
PackageFile: MSGFplus_1.26.0.zip
PackageFileSize: 425.2 KiB

Command output

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###
### Running command:
###
###   rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.26.0.tar.gz
###
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* installing *source* package 'MSGFplus' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSGFplus'
    finding HTML links ... done
    MSGFplus-package                        html  
    chargeRange                             html  
    db                                      html  
    enzyme                                  html  
    fragmentation                           html  
    getMSGFpar                              html  
    instrument                              html  
    isotopeError                            html  
    lengthRange                             html  
    matches                                 html  
    mods                                    html  
    msgfAsync-class                         html  
    msgfPar-class                           html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.13-bioc/tmpdir/RtmpKiOw7B/R.INSTALL954322319ed/MSGFplus/man/msgfPar-class.Rd:121: missing link 'msgfParGUI'
Rd warning: C:/Users/biocbuild/bbs-3.13-bioc/tmpdir/RtmpKiOw7B/R.INSTALL954322319ed/MSGFplus/man/msgfPar-class.Rd:148: missing link 'msgfParGUI'
    msgfPar                                 html  
    msgfParChargeRange-class                html  
    msgfParEnzyme-class                     html  
    msgfParFragmentation-class              html  
    msgfParFromID                           html  
    msgfParInstrument-class                 html  
    msgfParIsotopeError-class               html  
    msgfParLengthRange-class                html  
    msgfParMatches-class                    html  
    msgfParModification-class               html  
    msgfParModificationList-class           html  
    msgfParNtt-class                        html  
    msgfParProtocol-class                   html  
    msgfParTda-class                        html  
    msgfParTolerance-class                  html  
    ntt                                     html  
    protocol                                html  
    runMSGF                                 html  
    tda                                     html  
    tolerance                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MSGFplus' as MSGFplus_1.26.0.zip
* DONE (MSGFplus)