Back to Multiple platform build/check report for BioC 3.13
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).

INSTALL results for GWENA on tokay2

To the developers/maintainers of the GWENA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GWENA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 836/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GWENA 1.2.0  (landing page)
Gwenaëlle Lemoine
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/GWENA
git_branch: RELEASE_3_13
git_last_commit: a8f00b9
git_last_commit_date: 2021-05-19 12:53:41 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GWENA
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GWENA_1.2.0.tar.gz && rm -rf GWENA.buildbin-libdir && mkdir GWENA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GWENA.buildbin-libdir GWENA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GWENA_1.2.0.zip && rm GWENA_1.2.0.tar.gz GWENA_1.2.0.zip
StartedAt: 2021-10-14 09:55:53 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 09:57:21 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 87.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GWENA_1.2.0.tar.gz && rm -rf GWENA.buildbin-libdir && mkdir GWENA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GWENA.buildbin-libdir GWENA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GWENA_1.2.0.zip && rm GWENA_1.2.0.tar.gz GWENA_1.2.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 43 2581k   43 1110k    0     0  1759k      0  0:00:01 --:--:--  0:00:01 1759k
100 2581k  100 2581k    0     0  2233k      0  0:00:01  0:00:01 --:--:-- 2235k

install for i386

* installing *source* package 'GWENA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GWENA'
    finding HTML links ... done
    associate_phenotype                     html  
    bio_enrich                              html  
    build_graph_from_sq_mat                 html  
    build_net                               html  
    finding level-2 HTML links ... done

    compare_conditions                      html  
    detect_modules                          html  
    dot-check_data_expr                     html  
    dot-check_gost                          html  
    dot-check_module                        html  
    dot-check_network                       html  
    dot-contingencyTable                    html  
    dot-cor_func_match                      html  
    filter_RNA_seq                          html  
    filter_low_var                          html  
    get_fit.cor                             html  
    get_fit.expr                            html  
    get_hub_degree                          html  
    get_hub_genes                           html  
    get_hub_high_co                         html  
    get_hub_kleinberg                       html  
    get_sub_clusters                        html  
    gg_palette                              html  
    gtex_expr                               html  
    gtex_traits                             html  
    is_data_expr                            html  
    is_gost                                 html  
    is_module                               html  
    is_network                              html  
    join_gost                               html  
    kuehne_expr                             html  
    kuehne_traits                           html  
    matchsub                                html  
    orderAsNumeric                          html  
    plot_comparison_stats                   html  
    plot_enrichment                         html  
    plot_expression_profiles                html  
    plot_module                             html  
    plot_modules_merge                      html  
    plot_modules_phenotype                  html  
    quiet                                   html  
    z_summary                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GWENA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GWENA' as GWENA_1.2.0.zip
* DONE (GWENA)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GWENA' successfully unpacked and MD5 sums checked