| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:00 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the ChIPSeqSpike package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChIPSeqSpike.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 299/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Nicolas Descostes
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: ChIPSeqSpike |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ChIPSeqSpike_1.12.0.tar.gz && rm -rf ChIPSeqSpike.buildbin-libdir && mkdir ChIPSeqSpike.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPSeqSpike.buildbin-libdir ChIPSeqSpike_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ChIPSeqSpike_1.12.0.zip && rm ChIPSeqSpike_1.12.0.tar.gz ChIPSeqSpike_1.12.0.zip |
| StartedAt: 2021-10-14 10:38:49 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:40:28 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 99.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ChIPSeqSpike_1.12.0.tar.gz && rm -rf ChIPSeqSpike.buildbin-libdir && mkdir ChIPSeqSpike.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPSeqSpike.buildbin-libdir ChIPSeqSpike_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ChIPSeqSpike_1.12.0.zip && rm ChIPSeqSpike_1.12.0.tar.gz ChIPSeqSpike_1.12.0.zip
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install for i386
* installing *source* package 'ChIPSeqSpike' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ChIPSeqSpike'
finding HTML links ... done
ChIPSeqSpikeCore html
ChIPSeqSpikeDataset-class html
ChIPSeqSpikeDatasetBoost-class html
ChIPSeqSpikeDatasetList-class html
ChIPSeqSpikeDatasetListBoost-class html
Experiment-class html
ExperimentLoaded-class html
averageBindingValues html
bigWigFile html
boxplotSpike html
count html
datasetList html
estimateScalingFactors html
exoCount html
exogenousScalingFactor html
experimentList html
exportBigWigs html
extractBinding html
getAverageBindingValues html
getBam html
getBigWigFile html
getCount html
getDatasetList html
getExoCount html
getExogenousBam html
getExogenousScalingFactor html
getExpName html
getExperimentList html
getExperimentListBigWigs html
getLoadedData html
getMatBindingValues html
getRatio html
getScalingFactor html
inputSubtraction html
matBindingValues html
plotCor html
plotHeatmaps html
plotProfile html
plotTransform html
ratio html
result_data html
scaling html
scalingFactor html
spikeDataset html
spikePipe html
spikeSummary html
** building package indices
** installing vignettes
'ChIPSeqSpike.Rmd' using 'UTF-8'
** testing if installed package can be loaded from temporary location
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ChIPSeqSpike' ...
** testing if installed package can be loaded
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
Bioconductor version 3.14
* MD5 sums
packaged installation of 'ChIPSeqSpike' as ChIPSeqSpike_1.12.0.zip
* DONE (ChIPSeqSpike)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ChIPSeqSpike' successfully unpacked and MD5 sums checked