| Back to Build/check report for BioC 3.12 experimental data |
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This page was generated on 2021-05-06 14:10:15 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the TCGAMethylation450k package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 369/398 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| TCGAMethylation450k 1.26.0 (landing page) Sean Davis
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||
| Package: TCGAMethylation450k |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:TCGAMethylation450k.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings TCGAMethylation450k_1.26.0.tar.gz |
| StartedAt: 2021-05-06 12:51:12 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 12:51:25 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 13.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: TCGAMethylation450k.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:TCGAMethylation450k.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings TCGAMethylation450k_1.26.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.12-data-experiment/meat/TCGAMethylation450k.Rcheck’
* using R version 4.0.5 (2021-03-31)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘TCGAMethylation450k/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘TCGAMethylation450k’ version ‘1.26.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘TCGAMethylation450k’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 154.5Mb
sub-directories of 1Mb or more:
extdata 154.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.12-data-experiment/meat/TCGAMethylation450k.Rcheck/00check.log’
for details.
TCGAMethylation450k.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL TCGAMethylation450k ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘TCGAMethylation450k’ ... ** using staged installation ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TCGAMethylation450k)