| Back to Build/check report for BioC 3.12 experimental data |
|
This page was generated on 2021-05-06 14:10:08 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the Fletcher2013a package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 123/398 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| Fletcher2013a 1.26.0 (landing page) Mauro Castro
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||
| Package: Fletcher2013a |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:Fletcher2013a.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings Fletcher2013a_1.26.0.tar.gz |
| StartedAt: 2021-05-06 11:59:29 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 12:00:14 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 45.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: Fletcher2013a.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:Fletcher2013a.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings Fletcher2013a_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.12-data-experiment/meat/Fletcher2013a.Rcheck’
* using R version 4.0.5 (2021-03-31)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘Fletcher2013a/DESCRIPTION’ ... OK
* this is package ‘Fletcher2013a’ version ‘1.26.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘Fletcher2013a’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 72.9Mb
sub-directories of 1Mb or more:
data 72.7Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.12-data-experiment/meat/Fletcher2013a.Rcheck/00check.log’
for details.
Fletcher2013a.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL Fletcher2013a ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘Fletcher2013a’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Fletcher2013a)
Fletcher2013a.Rcheck/Fletcher2013a-Ex.timings
| name | user | system | elapsed | |
| Exp1 | 0.720 | 0.028 | 0.751 | |
| Exp2 | 0.620 | 0.032 | 0.651 | |
| Exp3 | 0.836 | 0.044 | 0.879 | |
| Fletcher2013a.pipelines | 0 | 0 | 0 | |
| siESR1 | 0.192 | 0.000 | 0.192 | |
| siOTHERS | 0.492 | 0.012 | 0.504 | |