| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:29:39 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the waddR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1948/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| waddR 1.4.0 (landing page) Julian Flesch
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: waddR |
| Version: 1.4.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL waddR |
| StartedAt: 2021-05-05 16:30:32 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:31:22 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 50.0 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL waddR
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘waddR’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I/usr/local/include -fpic -g -O2 -Wall -c wasserstein.cpp -o wasserstein.o
wasserstein.cpp: In function ‘std::vector<double> rep_weighted(std::vector<double>, std::vector<int, std::allocator<int> >)’:
wasserstein.cpp:348:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0; i<x.size(); i++) {
~^~~~~~~~~
wasserstein.cpp: In function ‘std::vector<double> concat(std::vector<double>&, std::vector<double>&)’:
wasserstein.cpp:386:27: warning: variable ‘out_it_end’ set but not used [-Wunused-but-set-variable]
vector<double>::iterator out_it_end = out.end();
^~~~~~~~~~
wasserstein.cpp: In function ‘std::vector<int, std::allocator<int> > interval_table(const std::vector<double>&, const std::vector<double>&, int)’:
wasserstein.cpp:584:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (data_i < datavec.size()) {
~~~~~~~^~~~~~~~~~~~~~~~
wasserstein.cpp: In function ‘double cor_test_export(Rcpp::NumericVector, Rcpp::NumericVector)’:
wasserstein.cpp:1094:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++) { x[i] = x_[i];}
~^~~~~~~~~
wasserstein.cpp:1095:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int j=0; j<y.size(); j++) { y[j] = y_[j];}
~^~~~~~~~~
wasserstein.cpp: In instantiation of ‘double cor(const std::vector<T>&, const std::vector<T>&, double, double) [with T = double]’:
wasserstein.cpp:720:49: required from here
wasserstein.cpp:439:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++){
wasserstein.cpp: In instantiation of ‘std::vector<T> operator-(const std::vector<T>&, const std::vector<T>&) [with T = double]’:
wasserstein.cpp:782:44: required from here
wasserstein.cpp:121:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++) {
wasserstein.cpp: In instantiation of ‘std::vector<T> cumSum(const std::vector<T>&, int) [with T = double]’:
wasserstein.cpp:890:17: required from here
wasserstein.cpp:472:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
int upper = ((last_index > 0) && (last_index <= x.size())
~~~~~~~~~~~~^~~~~~~~~~~~
wasserstein.cpp: In instantiation of ‘std::vector<T> operator*(const std::vector<T>&, const std::vector<T>&) [with T = double]’:
wasserstein.cpp:918:62: required from here
wasserstein.cpp:101:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++) {
wasserstein.cpp: In instantiation of ‘std::vector<T> operator+(std::vector<T>, std::vector<T>) [with T = double]’:
wasserstein.cpp:939:15: required from here
wasserstein.cpp:53:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++) {
wasserstein.cpp: In instantiation of ‘std::vector<T> operator/(const std::vector<T>&, const std::vector<T>&) [with T = double]’:
wasserstein.cpp:1052:15: required from here
wasserstein.cpp:169:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i=0; i<x.size(); i++) {
wasserstein.cpp: In instantiation of ‘std::vector<T> quantile(const std::vector<T>&, std::vector<double>, int) [with T = double]’:
wasserstein.cpp:1168:27: required from here
wasserstein.cpp:501:4: warning: unused variable ‘max_x’ [-Wunused-variable]
T max_x = x_sorted[n-1];
^~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o waddR.so RcppExports.o wasserstein.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-waddR/00new/waddR/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (waddR)