Alba Gutierrez-Sacristan
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/psygenet2r |
| Branch: RELEASE_3_12 |
| Last Commit: c203eaf |
| Last Changed Date: 2021-01-28 14:18:44 -0400 (Thu, 28 Jan 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:52 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the psygenet2r package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1410/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| psygenet2r 1.22.5 (landing page) Alba Gutierrez-Sacristan
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: psygenet2r |
| Version: 1.22.5 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/psygenet2r_1.22.5.tar.gz && rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.22.5.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL psygenet2r_1.22.5.zip && rm psygenet2r_1.22.5.tar.gz psygenet2r_1.22.5.zip |
| StartedAt: 2021-05-05 18:59:36 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:00:42 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 65.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/psygenet2r_1.22.5.tar.gz && rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.22.5.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL psygenet2r_1.22.5.zip && rm psygenet2r_1.22.5.tar.gz psygenet2r_1.22.5.zip
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install for i386
* installing *source* package 'psygenet2r' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'psygenet2r'
finding HTML links ... done
DataGeNET.Psy-class html
JaccardIndexPsy-class html
enrichedPD-methods html
extract html
extractSentences html
geneAttrPlot-methods html
getUMLs-methods html
jaccardEstimation-methods html
ndisease html
ngene html
pantherGraphic-methods html
plot-DataGeNET.Psy-ANY-method html
plot-JaccardIndexPsy-ANY-method html
psygenet2r html
psygenetDisease-methods html
psygenetDiseaseSentences html
psygenetGene-methods html
psygenetGeneSentences html
qr html
topAnatEnrichment-methods html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpA1NdTn/R.INSTALL262474806dce/psygenet2r/man/topAnatEnrichment-methods.Rd:26: file link 'runTest' in package 'topGO' does not exist and so has been treated as a topic
universe html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'psygenet2r' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'psygenet2r' as psygenet2r_1.22.5.zip
* DONE (psygenet2r)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'psygenet2r' successfully unpacked and MD5 sums checked