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INSTALL report for metagenomeFeatures on tokay1

This page was generated on 2021-05-06 12:32:11 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the metagenomeFeatures package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1053/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metagenomeFeatures 2.10.0  (landing page)
Nathan D. Olson
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/metagenomeFeatures
Branch: RELEASE_3_12
Last Commit: 880eaad
Last Changed Date: 2020-10-27 11:08:40 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    ERROR  skipped
tokay1Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: metagenomeFeatures
Version: 2.10.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/metagenomeFeatures_2.10.0.tar.gz && rm -rf metagenomeFeatures.buildbin-libdir && mkdir metagenomeFeatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagenomeFeatures.buildbin-libdir metagenomeFeatures_2.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL metagenomeFeatures_2.10.0.zip && rm metagenomeFeatures_2.10.0.tar.gz metagenomeFeatures_2.10.0.zip
StartedAt: 2021-05-05 17:14:04 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:15:08 -0400 (Wed, 05 May 2021)
EllapsedTime: 64.0 seconds
RetCode: 0
Status:   OK   

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/metagenomeFeatures_2.10.0.tar.gz && rm -rf metagenomeFeatures.buildbin-libdir && mkdir metagenomeFeatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagenomeFeatures.buildbin-libdir metagenomeFeatures_2.10.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL metagenomeFeatures_2.10.0.zip && rm metagenomeFeatures_2.10.0.tar.gz metagenomeFeatures_2.10.0.zip
###
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100 2647k  100 2647k    0     0  33.5M      0 --:--:-- --:--:-- --:--:-- 34.0M

install for i386

* installing *source* package 'metagenomeFeatures' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'metagenomeFeatures'
    finding HTML links ... done
    MgDb-accessor                           html  
    MgDb-class                              html  
    MgDb-methods                            html  
    annotateFeatures-MgDb-method            html  
    get_gg13.8_85MgDb                       html  
    make_mgdb_sqlite                        html  
    mgFeatures-accessors                    html  
    mgFeatures-class                        html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmp4i5S8c/R.INSTALL15ac58f9b14/metagenomeFeatures/man/mgFeatures-class.Rd:27: file link 'DataFrame' in package 'S4Vectors' does not exist and so has been treated as a topic
    mgFeatures-methods                      html  
    mock_mgF                                html  
    mock_query_df                           html  
    newMgDb                                 html  
    qiita_study_94_gg_ids                   html  
    reexports                               html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmp4i5S8c/R.INSTALL15ac58f9b14/metagenomeFeatures/man/reexports.Rd:14: file link '%>%' in package 'magrittr' does not exist and so has been treated as a topic
    select-MgDb-method                      html  
    taxa_                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metagenomeFeatures' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'metagenomeFeatures' as metagenomeFeatures_2.10.0.zip
* DONE (metagenomeFeatures)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'metagenomeFeatures' successfully unpacked and MD5 sums checked