| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:06 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the makecdfenv package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 994/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| makecdfenv 1.66.0 (landing page) James W. MacDonald
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: makecdfenv |
| Version: 1.66.0 |
| Command: rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.66.0.tar.gz |
| StartedAt: 2021-05-06 09:26:02 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 09:26:45 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 42.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: makecdfenv_1.66.0.zip |
| PackageFileSize: 3.326 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.66.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'makecdfenv' ...
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/include" -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -DHAVE_ZLIB -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c read_cdffile.c -o read_cdffile.o
read_cdffile.c: In function 'readQC':
read_cdffile.c:576:7: warning: variable 'typeQC' set but not used [-Wunused-but-set-variable]
int typeQC;
^~~~~~
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o makecdfenv.dll tmp.def read_cdffile.o -LC:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/libs/i386 -lzlib1bioc -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/makecdfenv.buildbin-libdir/00LOCK-makecdfenv/00new/makecdfenv/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'makecdfenv'
finding HTML links ... done
Cdf-class html
getInfoInAffyFile html
make.cdf.env html
make.cdf.package html
pmormm html
read.cdffile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'makecdfenv' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/include" -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -DHAVE_ZLIB -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c read_cdffile.c -o read_cdffile.o
read_cdffile.c: In function 'readQC':
read_cdffile.c:576:7: warning: variable 'typeQC' set but not used [-Wunused-but-set-variable]
int typeQC;
^~~~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o makecdfenv.dll tmp.def read_cdffile.o -LC:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/libs/x64 -lzlib1bioc -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/makecdfenv.buildbin-libdir/makecdfenv/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'makecdfenv' as makecdfenv_1.66.0.zip
* DONE (makecdfenv)