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BUILD BIN report for made4 on tokay1

This page was generated on 2021-05-06 12:32:06 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the made4 package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 988/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
made4 1.64.0  (landing page)
Aedin Culhane
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/made4
Branch: RELEASE_3_12
Last Commit: 89d0a81
Last Changed Date: 2020-10-27 10:25:28 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: made4
Version: 1.64.0
Command: rm -rf made4.buildbin-libdir && mkdir made4.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=made4.buildbin-libdir made4_1.64.0.tar.gz
StartedAt: 2021-05-06 09:25:42 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:26:27 -0400 (Thu, 06 May 2021)
EllapsedTime: 45.2 seconds
RetCode: 0
Status:   OK   
PackageFile: made4_1.64.0.zip
PackageFileSize: 1.412 MiB

Command output

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###
### Running command:
###
###   rm -rf made4.buildbin-libdir && mkdir made4.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=made4.buildbin-libdir made4_1.64.0.tar.gz
###
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install for i386

* installing *source* package 'made4' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'made4'
    finding HTML links ... done
    NCI60                                   html  
    asDataFrame                             html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/asDataFrame.Rd:14: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/asDataFrame.Rd:24: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    bet.coinertia                           html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bet.coinertia.Rd:14: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bet.coinertia.Rd:21: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    between.graph                           html  
    bga                                     html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.Rd:16: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    bga.jackknife                           html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.jackknife.Rd:37: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
    bga.suppl                               html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.suppl.Rd:13: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.suppl.Rd:19: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.suppl.Rd:45: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/bga.suppl.Rd:63: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
    checkfac                                html  
    chime3D                                 html  
    cia                                     html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/cia.Rd:14: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/cia.Rd:20: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    commonMap                               html  
    comparelists                            html  
    do3d                                    html  
    dudi.rwcoa                              html  
    forrwcoa                                html  
    genes                                   html  
    genes1d                                 html  
    getcol                                  html  
    graph1D                                 html  
    heatplot                                html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/heatplot.Rd:20: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    html3D                                  html  
    isDataFrame                             html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/isDataFrame.Rd:14: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/isDataFrame.Rd:28: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    jmol3D                                  html  
    khan                                    html  
    ord                                     html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/ord.Rd:14: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    overview                                html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/overview.Rd:11: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    plotarrays                              html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/plotarrays.Rd:47: file link 's.groups' in package 'made4' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/plotarrays.Rd:48: file link 's.match.col' in package 'made4' does not exist and so has been treated as a topic
    plotgenes                               html  
    prettyDend                              html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/prettyDend.Rd:12: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
    randomiser                              html  
    s.var                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/s.var.Rd:65: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/s.var.Rd:65: file link 'plot.cia' in package 'made4' does not exist and so has been treated as a topic
    sumstats                                html  
    suppl                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/suppl.Rd:18: file link 'ExpressionSet-class' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/suppl.Rd:39: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpY3Jx8k/R.INSTALL3ad83dce6d11/made4/man/suppl.Rd:48: file link 'plot.bga' in package 'made4' does not exist and so has been treated as a topic
    topgenes                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'made4' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'made4' as made4_1.64.0.zip
* DONE (made4)