David Porubsky
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/breakpointR |
| Branch: RELEASE_3_12 |
| Last Commit: 8542f20 |
| Last Changed Date: 2020-10-27 11:38:49 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:05 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the breakpointR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 206/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| breakpointR 1.8.0 (landing page) David Porubsky
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: breakpointR |
| Version: 1.8.0 |
| Command: rm -rf breakpointR.buildbin-libdir && mkdir breakpointR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=breakpointR.buildbin-libdir breakpointR_1.8.0.tar.gz |
| StartedAt: 2021-05-06 08:35:33 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 08:37:04 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 91.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: breakpointR_1.8.0.zip |
| PackageFileSize: 581.6 KiB |
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### Running command:
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### rm -rf breakpointR.buildbin-libdir && mkdir breakpointR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=breakpointR.buildbin-libdir breakpointR_1.8.0.tar.gz
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install for i386
* installing *source* package 'breakpointR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'breakpointR'
finding HTML links ... done
BreakPoint html
finding level-2 HTML links ... done
breakSeekr html
breakpointR-package html
breakpointr html
breakpointr2UCSC html
collapseBins html
confidenceInterval html
confidenceInterval.binomial html
createCompositeFile html
deltaWCalculator html
deltaWCalculatorVariousWindows html
exportRegions html
genotype.binom html
genotype.fisher html
genotyping html
hotspotter html
insertchr html
loadFromFiles html
plotBreakpoints html
plotBreakpointsPerChr html
plotHeatmap html
ranges2UCSC html
readBamFileAsGRanges html
readConfig html
removeDoubleSCEs html
removeReadPileupSpikes html
runBreakpointr html
summarizeBreaks html
synchronizeReadDir html
transCoord html
writeConfig html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'breakpointR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'breakpointR' as breakpointR_1.8.0.zip
* DONE (breakpointR)