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INSTALL report for RCAS on tokay1

This page was generated on 2021-05-06 12:33:07 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the RCAS package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1465/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RCAS 1.16.0  (landing page)
Bora Uyar
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/RCAS
Branch: RELEASE_3_12
Last Commit: ece9ca7
Last Changed Date: 2020-10-27 11:16:18 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: RCAS
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/RCAS_1.16.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL RCAS_1.16.0.zip && rm RCAS_1.16.0.tar.gz RCAS_1.16.0.zip
StartedAt: 2021-05-05 18:58:07 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 19:00:30 -0400 (Wed, 05 May 2021)
EllapsedTime: 143.2 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/RCAS_1.16.0.tar.gz && rm -rf RCAS.buildbin-libdir && mkdir RCAS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCAS.buildbin-libdir RCAS_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL RCAS_1.16.0.zip && rm RCAS_1.16.0.tar.gz RCAS_1.16.0.zip
###
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100 1644k  100 1644k    0     0  24.0M      0 --:--:-- --:--:-- --:--:-- 24.3M

install for i386

* installing *source* package 'RCAS' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RCAS'
    finding HTML links ... done
    calculateCoverageProfile                html  
    calculateCoverageProfileFromTxdb        html  
    calculateCoverageProfileList            html  
    calculateCoverageProfileListFromTxdb    html  
    checkSeqDb                              html  
    createControlRegions                    html  
    createDB                                html  
    createOrthologousGeneSetList            html  
    deleteSampleDataFromDB                  html  
    discoverFeatureSpecificMotifs           html  
    extractSequences                        html  
    findDifferentialMotifs                  html  
    findEnrichedFunctions                   html  
    generateKmers                           html  
    getFeatureBoundaryCoverage              html  
    getFeatureBoundaryCoverageBin           html  
    getFeatureBoundaryCoverageMulti         html  
    getIntervalOverlapMatrix                html  
    getMotifSummaryTable                    html  
    getTargetedGenesTable                   html  
    getTxdbFeatures                         html  
    getTxdbFeaturesFromGRanges              html  
    gff                                     html  
    importBed                               html  
    importBedFiles                          html  
    importGtf                               html  
    parseMsigdb                             html  
    plotFeatureBoundaryCoverage             html  
    printMsigdbDataset                      html  
    queryGff                                html  
    queryRegions                            html  
    retrieveOrthologs                       html  
    runGSEA                                 html  
    runMotifDiscovery                       html  
    runMotifRG                              html  
    runReport                               html  
    runReportMetaAnalysis                   html  
    runTopGO                                html  
    summarizeDatabaseContent                html  
    summarizeQueryRegions                   html  
    summarizeQueryRegionsMulti              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RCAS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RCAS' as RCAS_1.16.0.zip
* DONE (RCAS)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'RCAS' successfully unpacked and MD5 sums checked