| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:28:21 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the MultiBaC package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1175/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MultiBaC 1.0.0 (landing page) The package maintainer
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: MultiBaC |
| Version: 1.0.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings MultiBaC_1.0.0.tar.gz |
| StartedAt: 2021-05-06 03:49:45 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 03:52:06 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 141.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MultiBaC.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings MultiBaC_1.0.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.12-bioc/meat/MultiBaC.Rcheck’
* using R version 4.0.5 (2021-03-31)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MultiBaC/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MultiBaC’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MultiBaC’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
MultiBaC 12.276 0.076 12.366
plot 11.888 0.000 11.906
batchCorrection 11.528 0.008 11.551
inner_relPlot 11.428 0.012 11.475
ARSyNbac 10.996 0.180 11.182
explained_varPlot 11.044 0.000 11.070
plot_pca 10.848 0.000 10.872
Q2_plot 10.408 0.012 10.434
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
MultiBaC.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL MultiBaC ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘MultiBaC’ ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultiBaC)
MultiBaC.Rcheck/MultiBaC-Ex.timings
| name | user | system | elapsed | |
| ARSyNbac | 10.996 | 0.180 | 11.182 | |
| MultiBaC | 12.276 | 0.076 | 12.366 | |
| Q2_plot | 10.408 | 0.012 | 10.434 | |
| batchCorrection | 11.528 | 0.008 | 11.551 | |
| batchEstPlot | 1.160 | 0.000 | 1.165 | |
| createMbac | 0.396 | 0.000 | 0.395 | |
| explained_varPlot | 11.044 | 0.000 | 11.070 | |
| genMissingOmics | 1.428 | 0.000 | 1.431 | |
| genModelList | 0.952 | 0.000 | 0.952 | |
| inner_relPlot | 11.428 | 0.012 | 11.475 | |
| multiyeast | 0.004 | 0.000 | 0.004 | |
| plot | 11.888 | 0.000 | 11.906 | |
| plot_pca | 10.848 | 0.000 | 10.872 | |