Back to Multiple platform build/check report for BioC 3.12
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

INSTALL report for IntEREst on tokay1

This page was generated on 2021-05-06 12:31:51 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the IntEREst package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 904/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IntEREst 1.14.0  (landing page)
Ali Oghabian , Mikko Frilander
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/IntEREst
Branch: RELEASE_3_12
Last Commit: 514e896
Last Changed Date: 2020-10-27 11:22:16 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: IntEREst
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/IntEREst_1.14.0.tar.gz && rm -rf IntEREst.buildbin-libdir && mkdir IntEREst.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IntEREst.buildbin-libdir IntEREst_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL IntEREst_1.14.0.zip && rm IntEREst_1.14.0.tar.gz IntEREst_1.14.0.zip
StartedAt: 2021-05-05 18:18:07 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:19:35 -0400 (Wed, 05 May 2021)
EllapsedTime: 88.6 seconds
RetCode: 0
Status:   OK   

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/IntEREst_1.14.0.tar.gz && rm -rf IntEREst.buildbin-libdir && mkdir IntEREst.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IntEREst.buildbin-libdir IntEREst_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL IntEREst_1.14.0.zip && rm IntEREst_1.14.0.tar.gz IntEREst_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  961k  100  961k    0     0  30.5M      0 --:--:-- --:--:-- --:--:-- 31.2M

install for i386

* installing *source* package 'IntEREst' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IntEREst'
    finding HTML links ... done
    DEXSeqIntEREst                          html  
    IntEREst-package                        html  
    addAnnotation                           html  
    annotateU12                             html  
    applyOverlap                            html  
    attributes                              html  
    boxplot-method                          html  
    buildSsTypePwms                         html  
    counts-method                           html  
    deseqInterest                           html  
    exactTestInterest                       html  
    getRepeatTable                          html  
    glmInterest                             html  
    interest                                html  
    interest.sequential                     html  
    interestResult                          html  
    interestResultIntEx                     html  
    intexIndex                              html  
    lfc                                     html  
    mdsChr22ExObj                           html  
    mdsChr22IntSpObj                        html  
    mdsChr22Obj                             html  
    mergeInterestResult                     html  
    plot-method                             html  
    psi                                     html  
    pwmU12db                                html  
    qlfInterest                             html  
    readInterestResults                     html  
    referencePrepare                        html  
    subInterestResult                       html  
    treatInterest                           html  
    u12                                     html  
    u12Boxplot                              html  
    u12BoxplotNb                            html  
    u12DensityPlot                          html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpYr0No7/R.INSTALL136830e4cdd/IntEREst/man/u12DensityPlot.Rd:123: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
    u12Index                                html  
    u12NbIndex                              html  
    unionRefTr                              html  
    updateRowDataCol                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'IntEREst' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IntEREst' as IntEREst_1.14.0.zip
* DONE (IntEREst)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'IntEREst' successfully unpacked and MD5 sums checked