| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:31:27 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the GeneticsDesign package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 703/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
The R Genetics Project
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: GeneticsDesign |
| Version: 1.58.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GeneticsDesign_1.58.0.tar.gz && rm -rf GeneticsDesign.buildbin-libdir && mkdir GeneticsDesign.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneticsDesign.buildbin-libdir GeneticsDesign_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GeneticsDesign_1.58.0.zip && rm GeneticsDesign_1.58.0.tar.gz GeneticsDesign_1.58.0.zip |
| StartedAt: 2021-05-05 18:27:55 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:28:12 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 16.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GeneticsDesign_1.58.0.tar.gz && rm -rf GeneticsDesign.buildbin-libdir && mkdir GeneticsDesign.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneticsDesign.buildbin-libdir GeneticsDesign_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GeneticsDesign_1.58.0.zip && rm GeneticsDesign_1.58.0.tar.gz GeneticsDesign_1.58.0.zip
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install for i386
* installing *source* package 'GeneticsDesign' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
Warning: newline within quoted string at GPC.Rd:38
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:40: unexpected section header '\value'
Warning: newline within quoted string at GPC.Rd:38
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:49: unexpected UNKNOWN '\item'
Warning: newline within quoted string at GPC.Rd:38
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:51: unexpected UNKNOWN '\item'
Warning: newline within quoted string at GPC.Rd:38
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:53: unexpected UNKNOWN '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:49: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:49: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:49: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:49: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:51: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:51: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:51: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:51: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:53: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpEz9dyj/R.INSTALL15684a382180/GeneticsDesign/man/GPC.Rd:53: All text must be in a section
*** installing help indices
converting help for package 'GeneticsDesign'
finding HTML links ... done
GPC html
GeneticPower.Quantitative.Numeric html
depreciated html
gregorius html
power.genotype.conti html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'GeneticsDesign' is deprecated and will be removed from
Bioconductor version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'GeneticsDesign' is deprecated and will be removed from
Bioconductor version 3.13
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneticsDesign' ...
** testing if installed package can be loaded
Warning: Package 'GeneticsDesign' is deprecated and will be removed from
Bioconductor version 3.13
* MD5 sums
packaged installation of 'GeneticsDesign' as GeneticsDesign_1.58.0.zip
* DONE (GeneticsDesign)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GeneticsDesign' successfully unpacked and MD5 sums checked