| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:06 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the BUScorrect package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 220/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BUScorrect 1.8.0 (landing page) Xiangyu Luo
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: BUScorrect |
| Version: 1.8.0 |
| Command: rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.8.0.tar.gz |
| StartedAt: 2021-05-06 08:36:37 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 08:37:33 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 55.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BUScorrect_1.8.0.zip |
| PackageFileSize: 3.641 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.8.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'BUScorrect' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUScorrect.buildbin-libdir/00LOCK-BUScorrect/00new/BUScorrect/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BUScorrect'
finding HTML links ... done
BIC_BUS html
BUScorrect-package html
BUSexample_data html
BUSgibbs html
IG_index html
Subtypes html
adjusted_values html
baseline_expression_values html
calculate_EPSR_gamma html
calculate_EPSR_mu html
calculate_EPSR_sigma_sq html
estimate_IG_indicators html
location_batch_effects html
postprob_DE html
postprob_DE_thr_fun html
print.BUSfits html
scale_batch_effects html
subtype_effects html
summary.BUSfits html
visualize_data html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BUScorrect' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUScorrect.buildbin-libdir/BUScorrect/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BUScorrect' as BUScorrect_1.8.0.zip
* DONE (BUScorrect)