Peter Blattmann
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/SWATH2stats |
| Branch: RELEASE_3_10 |
| Last Commit: a6faa31 |
| Last Changed Date: 2019-10-29 13:09:28 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:25:37 -0400 (Wed, 15 Apr 2020).
| Package 1692/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SWATH2stats 1.16.0 Peter Blattmann
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SWATH2stats |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/SWATH2stats_1.16.0.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.16.0.zip && rm SWATH2stats_1.16.0.tar.gz SWATH2stats_1.16.0.zip |
| StartedAt: 2020-04-14 19:23:28 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:24:08 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 39.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/SWATH2stats_1.16.0.tar.gz && rm -rf SWATH2stats.buildbin-libdir && mkdir SWATH2stats.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SWATH2stats.buildbin-libdir SWATH2stats_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL SWATH2stats_1.16.0.zip && rm SWATH2stats_1.16.0.tar.gz SWATH2stats_1.16.0.zip
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install for i386
* installing *source* package 'SWATH2stats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SWATH2stats'
finding HTML links ... done
JPP_update html
MSstats_data html
OpenSWATH_data html
SWATH2stats-package html
Spyogenes html
Study_design html
add_genesymbol html
assess_decoy_rate html
assess_fdr_byrun html
assess_fdr_overall html
convert4MSstats html
convert4PECA html
convert4aLFQ html
convert4mapDIA html
convert4pythonscript html
convert_protein_ids html
count_analytes html
disaggregate html
filter_all_peptides html
filter_mscore_all html
filter_mscore_fdr html
filter_on_max_peptides html
filter_on_min_peptides html
filter_proteotypic_peptides html
import_data html
load_mart html
mscore4assayfdr html
mscore4pepfdr html
mscore4protfdr html
plot.fdr_cube html
plot.fdr_table html
plot_correlation_between_samples html
plot_variation html
plot_variation_vs_total html
reduce_OpenSWATH_output html
removeDecoyProteins html
sample_annotation html
transform_MSstats_OpenSWATH html
unifyProteinGroupLabels html
write_matrix_peptides html
write_matrix_proteins html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SWATH2stats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SWATH2stats' as SWATH2stats_1.16.0.zip
* DONE (SWATH2stats)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'SWATH2stats' successfully unpacked and MD5 sums checked